Difference between revisions of "TRNA-pseudouridine-38-40"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10702 RXN-10702] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-_dehydrogenas...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == |
* direction: | * direction: | ||
− | ** | + | ** REVERSIBLE |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[ACRYLYL-COA]][c] '''+''' 1 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 acryloyl-CoA[c] '''+''' 1 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[Tiso_gene_5857]] |
− | ** | + | ** Source: [[orthology-athaliana]] |
− | + | ** Source: [[orthology-esiliculosus]] | |
− | + | ** Source: [[orthology-creinhardtii]] | |
− | ** | + | ** Source: [[orthology-creinhardtii]] |
− | + | * Gene: [[Tiso_gene_16703]] | |
− | + | ** Source: [[orthology-creinhardtii]] | |
− | + | * Gene: [[Tiso_gene_14257]] | |
− | + | ** Source: [[orthology-esiliculosus]] | |
− | ** | + | ** Source: [[orthology-creinhardtii]] |
− | + | ||
− | + | ||
− | ** [[ | + | |
− | * [[ | + | |
− | ** | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | * [[ | + | |
− | ** | + | |
− | + | ||
− | + | ||
− | + | ||
− | ** [[ | + | |
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574] |
− | ** ''' | + | ** '''3''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-3941]], β-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941] | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] | ||
+ | ** '''4''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] | ||
+ | ** '''8''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744] | ||
+ | ** '''2''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
− | |||
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− | |||
− | |||
− | |||
== External links == | == External links == | ||
− | + | * RHEA: | |
− | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518] | |
− | + | * LIGAND-RXN: | |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045] |
− | {{#set: ec number=EC- | + | {{#set: direction=REVERSIBLE}} |
− | {{#set: gene associated= | + | {{#set: ec number=EC-4.2.1.116}} |
− | {{#set: in pathway=PWY- | + | {{#set: gene associated=Tiso_gene_5857|Tiso_gene_16703|Tiso_gene_14257}} |
− | {{#set: reconstruction category=orthology | + | {{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction category=orthology}} |
− | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}} |
+ | {{#set: reconstruction tool=pantograph}} |
Revision as of 15:41, 21 March 2018
Contents
Reaction RXN-6383
- direction:
- REVERSIBLE
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 3-HYDROXY-PROPIONYL-COA[c] <=> 1 ACRYLYL-COA[c] + 1 WATER[c]
- With common name(s):
- 1 3-hydroxypropanoyl-CoA[c] <=> 1 acryloyl-CoA[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5857
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Source: orthology-creinhardtii
- Gene: Tiso_gene_16703
- Source: orthology-creinhardtii
- Gene: Tiso_gene_14257
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
Pathways
- PWY-7574, propanoyl-CoA degradation II: PWY-7574
- 3 reactions found over 5 reactions in the full pathway
- PWY-3941, β-alanine biosynthesis II: PWY-3941
- 2 reactions found over 6 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
- 4 reactions found over 11 reactions in the full pathway
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
- 8 reactions found over 16 reactions in the full pathway
- PWY-5744, glyoxylate assimilation: PWY-5744
- 2 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
External links