Difference between revisions of "NITRIC-OXIDE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** acetyl-_carbox...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase * ec n...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** ascorbate_peroxidase
−
** acetyl-_carboxylase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.55 EC-3.2.1.55]
+
** [http://enzyme.expasy.org/EC/1.11.1.11 EC-1.11.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** n [[WATER]][c] '''+''' 1 [[1-5-L-Arabinooligosaccharides]][c] '''=>''' n [[CPD-12045]][c]
+
** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** n H2O[c] '''+''' 1 a (1->5)-α-L-arabinan oligosaccharide[c] '''=>''' n α-L-arabinofuranose[c]
+
** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 H+[c] '''=>''' 2 H2O[c] '''+''' 1 L-ascorbate[c] '''+''' 1 L-dehydro-ascorbate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10897]]
+
* Gene: [[Tiso_gene_16028]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_6300]]
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* Gene: [[Tiso_gene_5435]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_14849]]
+
* Gene: [[Tiso_gene_15962]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_6299]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P82594 P82594]
 
−
** [http://www.uniprot.org/uniprot/Q9KBQ8 Q9KBQ8]
 
−
** [http://www.uniprot.org/uniprot/P42255 P42255]
 
−
** [http://www.uniprot.org/uniprot/P53627 P53627]
 
−
** [http://www.uniprot.org/uniprot/P49943 P49943]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=ascorbate_peroxidase}}
−
{{#set: common name=acetyl-_carboxylase}}
+
{{#set: ec number=EC-1.11.1.11}}
−
{{#set: ec number=EC-3.2.1.55}}
+
{{#set: gene associated=Tiso_gene_16028|Tiso_gene_5435|Tiso_gene_15962}}
−
{{#set: gene associated=Tiso_gene_10897|Tiso_gene_6300|Tiso_gene_14849|Tiso_gene_6299}}
+
{{#set: in pathway=PWY-6960|PWY-6959|PWY-6961}}
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:41, 21 March 2018

Reaction RXN-12440

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ascorbate_peroxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6960, L-ascorbate degradation III: PWY-6960
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6959, L-ascorbate degradation V: PWY-6959
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic): PWY-6961
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NITRIC-OXIDE&oldid=35669"