Difference between revisions of "Tiso gene 1739"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.125-RXN 2.4.1.125-RXN] == * direction: ** REVERSIBLE * common name: ** morn_repeat_protein *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10703 RXN-10703] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.125-RXN 2.4.1.125-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10703 RXN-10703] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** morn_repeat_protein
+
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 +
** 3-hydroxyacyl-_dehydrogenase
 +
** hydroxyacyl-coenzyme_a_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.5 EC-2.4.1.5]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
−
** [http://enzyme.expasy.org/EC/2.4.1.125 EC-2.4.1.125]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUCROSE]][c] '''+''' 1 [[1-6-alpha-D-glucan]][c] '''<=>''' 1 [[Fructofuranose]][c] '''+''' 1 [[1-6-alpha-D-glucan]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-11527]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11528]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sucrose[c] '''+''' 1 a 1-6-&alpha;-D-glucan[c] '''<=>''' 1 D-fructofuranose[c] '''+''' 1 a 1-6-&alpha;-D-glucan[c]
+
** 1 NAD+[c] '''+''' 1 OPC4-3-hydroxyacyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 OPC4-3-ketoacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3363]]
+
* Gene: [[Tiso_gene_18838]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5857]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18839]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14262]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14027]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14026]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''15''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02120 R02120]
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
* UNIPROT:
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/O52224 O52224]
+
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
−
** [http://www.uniprot.org/uniprot/Q7M102 Q7M102]
+
{{#set: ec number=EC-1.1.1.35}}
−
** [http://www.uniprot.org/uniprot/Q7M0M1 Q7M0M1]
+
{{#set: gene associated=Tiso_gene_18838|Tiso_gene_5857|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_14027|Tiso_gene_14026}}
−
** [http://www.uniprot.org/uniprot/P13470 P13470]
+
{{#set: in pathway=PWY-735}}
−
** [http://www.uniprot.org/uniprot/Q48756 Q48756]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/Q9CDJ6 Q9CDJ6]
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/Q9CDJ7 Q9CDJ7]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q54178 Q54178]
+
−
** [http://www.uniprot.org/uniprot/Q7M0L7 Q7M0L7]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=morn_repeat_protein}}
+
−
{{#set: ec number=EC-2.4.1.5}}
+
−
{{#set: ec number=EC-2.4.1.125}}
+
−
{{#set: gene associated=Tiso_gene_3363}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:41, 21 March 2018

Reaction RXN-10703

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 OPC4-3-hydroxyacyl-CoA[c] => 1 NADH[c] + 1 H+[c] + 1 OPC4-3-ketoacyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1739&oldid=35678"