Difference between revisions of "RXN-15345"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.63-RXN 2.1.1.63-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** heat_shock_40_kda_pro...")
(Created page with "Category:Gene == Gene Tiso_gene_1611 == * right end position: ** 22757 * transcription direction: ** NEGATIVE * left end position: ** 11099 * centisome position: ** 48.488...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.63-RXN 2.1.1.63-RXN] ==
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== Gene Tiso_gene_1611 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 22757
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* common name:
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* transcription direction:
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** heat_shock_40_kda_protein
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** NEGATIVE
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** domain-containing_protein
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* left end position:
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* ec number:
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** 11099
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** [http://enzyme.expasy.org/EC/2.1.1.63 EC-2.1.1.63]
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* centisome position:
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** 48.488422   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[DNA-6-O-Methyl-Guanines]][c] '''+''' 1 [[PROT-CYS]][c] '''=>''' 1 [[Protein-S-methyl-L-cysteine]][c] '''+''' 1 [[DNA-Guanines]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 an O6-methylguanine in DNA[c] '''+''' 1 a [protein]-L-cysteine[c] '''=>''' 1 a [protein]-S-methyl-L-cysteine[c] '''+''' 1 a guanine in DNA[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_12732]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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* [[Tiso_gene_12990]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN0-5462]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=22757}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04314 R04314]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: left end position=11099}}
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** [http://www.uniprot.org/uniprot/P26187 P26187]
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{{#set: centisome position=48.488422    }}
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** [http://www.uniprot.org/uniprot/O67467 O67467]
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/Q9V1N7 Q9V1N7]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/O26715 O26715]
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** [http://www.uniprot.org/uniprot/O27970 O27970]
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** [http://www.uniprot.org/uniprot/Q9ZLG2 Q9ZLG2]
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** [http://www.uniprot.org/uniprot/O25387 O25387]
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** [http://www.uniprot.org/uniprot/O59499 O59499]
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** [http://www.uniprot.org/uniprot/Q9PP87 Q9PP87]
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** [http://www.uniprot.org/uniprot/Q9KKT3 Q9KKT3]
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** [http://www.uniprot.org/uniprot/P44687 P44687]
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** [http://www.uniprot.org/uniprot/O83177 O83177]
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** [http://www.uniprot.org/uniprot/Q58924 Q58924]
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** [http://www.uniprot.org/uniprot/P0A696 P0A696]
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** [http://www.uniprot.org/uniprot/Q9WZY9 Q9WZY9]
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** [http://www.uniprot.org/uniprot/P52982 P52982]
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** [http://www.uniprot.org/uniprot/Q9ZBT7 Q9ZBT7]
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** [http://www.uniprot.org/uniprot/Q9ZBF1 Q9ZBF1]
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** [http://www.uniprot.org/uniprot/O74023 O74023]
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** [http://www.uniprot.org/uniprot/P11742 P11742]
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** [http://www.uniprot.org/uniprot/P19220 P19220]
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** [http://www.uniprot.org/uniprot/P26188 P26188]
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** [http://www.uniprot.org/uniprot/P0AFH0 P0AFH0]
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** [http://www.uniprot.org/uniprot/P16455 P16455]
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** [http://www.uniprot.org/uniprot/P24528 P24528]
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** [http://www.uniprot.org/uniprot/P26189 P26189]
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** [http://www.uniprot.org/uniprot/P06134 P06134]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=heat_shock_40_kda_protein}}
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{{#set: common name=domain-containing_protein}}
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{{#set: ec number=EC-2.1.1.63}}
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{{#set: gene associated=Tiso_gene_12732|Tiso_gene_12990}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:42, 21 March 2018

Gene Tiso_gene_1611

  • right end position:
    • 22757
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 11099
  • centisome position:
    • 48.488422
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15345&oldid=35714"