Difference between revisions of "H2PTEROATESYNTH-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14065 RXN-14065] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside_hydrolase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_7381 == * right end position: ** 9754 * transcription direction: ** POSITIVE * left end position: ** 8039 * centisome position: ** 71.49591...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14065 RXN-14065] ==
+
== Gene Tiso_gene_7381 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 9754
* common name:
+
* transcription direction:
** nucleoside_hydrolase
+
** POSITIVE
* ec number:
+
* left end position:
** [http://enzyme.expasy.org/EC/3.2.2.10 EC-3.2.2.10]
+
** 8039
 +
* centisome position:
 +
** 71.49591   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[HISTALDEHYD-RXN]]
** 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTOSINE]][c] '''+''' 1 [[CPD-15317]][c]
+
** Source: [[orthology-esiliculosus]]
* With common name(s):
+
* Reaction: [[HISTOLDEHYD-RXN]]
** 1 CMP[c] '''+''' 1 H2O[c] '''=>''' 1 cytosine[c] '''+''' 1 D-ribofuranose 5-phosphate[c]
+
** Source: [[orthology-esiliculosus]]
 
+
* Reaction: [[PYRROLINECARBDEHYDROG-RXN]]
== Genes associated with this reaction  ==
+
** Source: [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
* [[Tiso_gene_11910]]
+
** Source: [[annotation-experimental_annotation]]
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
***AUTOMATED-NAME-MATCH
+
* Reaction: [[RXN-14116]]
* [[Tiso_gene_12995]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
== Pathways  ==
+
* [[PWY-7570]], blasticidin S biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7570 PWY-7570]
+
** '''1''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-7569]], arginomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7569 PWY-7569]
+
** '''1''' reactions found over '''9''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-8001]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[PROUT-PWY]]
 +
* [[ARGASEDEG-PWY]]
 +
* [[PWY-6853]]
 +
* [[HISTSYN-PWY]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: right end position=9754}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30078 30078]
+
{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
+
{{#set: left end position=8039}}
** [http://www.genome.jp/dbget-bin/www_bget?R00510 R00510]
+
{{#set: centisome position=71.49591    }}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=HISTALDEHYD-RXN|HISTOLDEHYD-RXN|PYRROLINECARBDEHYDROG-RXN|RXN-14116|RXN-8001}}
{{#set: common name=nucleoside_hydrolase}}
+
{{#set: pathway associated=PROUT-PWY|ARGASEDEG-PWY|PWY-6853|HISTSYN-PWY}}
{{#set: ec number=EC-3.2.2.10}}
+
{{#set: gene associated=Tiso_gene_11910|Tiso_gene_12995}}
+
{{#set: in pathway=PWY-7570|PWY-7569}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:42, 21 March 2018

Gene Tiso_gene_7381

  • right end position:
    • 9754
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8039
  • centisome position:
    • 71.49591
  • Synonym(s):

Reactions associated

Pathways associated

External links