Difference between revisions of "1.14.13.8-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_9627 == * left end position: ** 61 * transcription direction: ** POSITIVE * right end position: ** 1407 * centisome position: ** 0.66586614...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYRISTOYLACYLTRAN-RXN MYRISTOYLACYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** lip...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9627 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYRISTOYLACYLTRAN-RXN MYRISTOYLACYLTRAN-RXN] ==
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* left end position:
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* direction:
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** 61
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** lipid_a_biosynthesis_acyltransferase
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* right end position:
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* ec number:
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** 1407
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** [http://enzyme.expasy.org/EC/2.3.1.243 EC-2.3.1.243]
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* centisome position:
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** 0.66586614   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.10.2.2-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[KDO2-LAUROYL-LIPID-IVA]][c] '''=>''' 1 [[KDO2-LIPID-A]][c] '''+''' 1 [[ACP]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 a myristoyl-[acp][c] '''+''' 1 α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA[c] '''=>''' 1 α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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***ec-number
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* [[RXN-14107]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_5065]]
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** experimental_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-15816]]
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* Gene: [[Tiso_gene_14060]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: AUTOMATED-NAME-MATCH
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** experimental_annotation
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== Pathways ==
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***ec-number
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* [[KDO-NAGLIPASYN-PWY]], superpathway of (Kdo)2-lipid A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=KDO-NAGLIPASYN-PWY KDO-NAGLIPASYN-PWY]
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* [[RXN-15829]]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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** in-silico_annotation
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* [[KDO-LIPASYN-PWY]], (Kdo)2-lipid A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPASYN-PWY KDO-LIPASYN-PWY]
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***ec-number
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** experimental_annotation
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== Reconstruction information  ==
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***ec-number
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* Category: [[annotation]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6692]]
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*** Tool: [[pathwaytools]]
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* [[PWY-7279]]
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* [[PWY-7082]]
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* [[PWY-3781]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=61}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28438 28438]
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{{#set: right end position=1407}}
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* LIGAND-RXN:
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{{#set: centisome position=0.66586614    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05075 R05075]
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{{#set: reaction associated=1.10.2.2-RXN|RXN-14107|RXN-15816|RXN-15829}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6692|PWY-7279|PWY-7082|PWY-3781}}
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{{#set: common name=lipid_a_biosynthesis_acyltransferase}}
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{{#set: ec number=EC-2.3.1.243}}
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{{#set: gene associated=Tiso_gene_5065|Tiso_gene_14060}}
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{{#set: in pathway=KDO-NAGLIPASYN-PWY|KDO-LIPASYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:43, 21 March 2018

Reaction MYRISTOYLACYLTRAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipid_a_biosynthesis_acyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a myristoyl-[acp][c] + 1 α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA[c] => 1 α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A[c] + 1 a holo-[acyl-carrier protein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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