Difference between revisions of "Trans-D2-cis-D5-lignoceroyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** serine_racemase ** t...")
(Created page with "Category:Gene == Gene Tiso_gene_3461 == * right end position: ** 9688 * transcription direction: ** NEGATIVE * left end position: ** 7158 * centisome position: ** 42.96776...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
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== Gene Tiso_gene_3461 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9688
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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** serine_racemase
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* left end position:
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** threonine_mitochondrial
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** 7158
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* centisome position:
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** 42.967766   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
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** 1 [[THR]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15056]][c]
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* With common name(s):
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** 1 L-threonine[c] '''=>''' 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17207]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12535]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8525]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
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** '''4''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=9688}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=serine_racemase}}
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{{#set: left end position=7158}}
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{{#set: common name=threonine_mitochondrial}}
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{{#set: centisome position=42.967766    }}
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{{#set: gene associated=Tiso_gene_17207|Tiso_gene_12535|Tiso_gene_8525}}
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{{#set: reaction associated=PROTEIN-TYROSINE-PHOSPHATASE-RXN}}
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{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:43, 21 March 2018

Gene Tiso_gene_3461

  • right end position:
    • 9688
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 7158
  • centisome position:
    • 42.967766
  • Synonym(s):

Reactions associated

Pathways associated

External links

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