Difference between revisions of "GLYOHMETRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_7800 == * right end position: ** 9172 * transcription direction: ** POSITIVE * left end position: ** 8299 * centisome position: ** 76.82837...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.1.99.4-RXN 4.1.99.4-RXN] ==
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== Gene Tiso_gene_7800 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9172
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.99.7 EC-3.5.99.7]
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** POSITIVE
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* left end position:
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** 8299
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* centisome position:
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** 76.82837   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ALDEHYDE-REDUCTASE-RXN]]
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** 1 [[CPD-68]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 1-aminocyclopropane-1-carboxylate[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
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* Reaction: [[RXN-12078]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14102]]
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* [[Tiso_gene_11198]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[RXN-8772]]
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== Pathways ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* Category: [[orthology]]
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* Reaction: [[RXN-8773]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5515]]
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* [[PWY-5516]]
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* [[PWY-6693]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9172}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16933 16933]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=8299}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00997 R00997]
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{{#set: centisome position=76.82837    }}
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* UNIPROT:
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{{#set: reaction associated=ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
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** [http://www.uniprot.org/uniprot/Q9V2L2 Q9V2L2]
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{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693}}
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** [http://www.uniprot.org/uniprot/Q9WY68 Q9WY68]
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** [http://www.uniprot.org/uniprot/P30297 P30297]
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** [http://www.uniprot.org/uniprot/Q7M523 Q7M523]
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** [http://www.uniprot.org/uniprot/Q9URX3 Q9URX3]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.99.7}}
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{{#set: gene associated=Tiso_gene_11198}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:44, 21 March 2018

Gene Tiso_gene_7800

  • right end position:
    • 9172
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8299
  • centisome position:
    • 76.82837
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLYOHMETRANS-RXN&oldid=35907"