Difference between revisions of "B-Gal-14-NacGlc-R"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10715 RXN-10715] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_8902 == * right end position: ** 4087 * transcription direction: ** POSITIVE * left end position: ** 196 * centisome position: ** 2.003885...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10715 RXN-10715] ==
+
== Gene Tiso_gene_8902 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 4087
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
+
** POSITIVE
 +
* left end position:
 +
** 196
 +
* centisome position:
 +
** 2.003885   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-12086]]
−
** 1 [[NAD]][c] '''+''' 1 [[INDOLE_ACETALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 NAD+[c] '''+''' 1 indole acetaldehyde[c] '''+''' 1 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
+
* Reaction: [[RXN-12579]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
−
* [[Tiso_gene_7322]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[athaliana]]
+
*** Assignment: automated-name-match
−
** [[pantograph]]-[[esiliculosus]]
+
== Pathways associated ==
−
* [[Tiso_gene_3513]]
+
* [[LIPAS-PWY]]
−
** [[pantograph]]-[[athaliana]]
+
* [[PWY-6857]]
−
== Pathways  ==
+
−
* [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=4087}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02678 R02678]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=196}}
−
{{#set: ec number=EC-1.2.1.3}}
+
{{#set: centisome position=2.003885    }}
−
{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
+
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
−
{{#set: in pathway=PWY-6307}}
+
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 15:45, 21 March 2018

Gene Tiso_gene_8902

  • right end position:
    • 4087
  • transcription direction:
    • POSITIVE
  • left end position:
    • 196
  • centisome position:
    • 2.003885
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=B-Gal-14-NacGlc-R&oldid=36035"