Difference between revisions of "B-Gal-14-NacGlc-R"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10715 RXN-10715] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_8902 == * right end position: ** 4087 * transcription direction: ** POSITIVE * left end position: ** 196 * centisome position: ** 2.003885...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10715 RXN-10715] ==
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== Gene Tiso_gene_8902 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4087
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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** POSITIVE
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* left end position:
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** 196
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* centisome position:
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** 2.003885   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[NAD]][c] '''+''' 1 [[INDOLE_ACETALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NAD+[c] '''+''' 1 indole acetaldehyde[c] '''+''' 1 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Tiso_gene_7322]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[Tiso_gene_3513]]
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* [[LIPAS-PWY]]
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** [[pantograph]]-[[athaliana]]
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* [[PWY-6857]]
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== Pathways  ==
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* [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4087}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02678 R02678]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=196}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: centisome position=2.003885    }}
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{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: in pathway=PWY-6307}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:45, 21 March 2018

Gene Tiso_gene_8902

  • right end position:
    • 4087
  • transcription direction:
    • POSITIVE
  • left end position:
    • 196
  • centisome position:
    • 2.003885
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=B-Gal-14-NacGlc-R&oldid=36035"