Difference between revisions of "RIBULOKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17893 RXN-17893] == * direction: ** LEFT-TO-RIGHT * common name: ** acylamino-acid-releasing_en...")
(Created page with "Category:Gene == Gene Tiso_gene_13230 == * right end position: ** 5508 * transcription direction: ** NEGATIVE * left end position: ** 3810 * centisome position: ** 59.1890...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17893 RXN-17893] ==
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== Gene Tiso_gene_13230 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5508
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* common name:
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* transcription direction:
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** acylamino-acid-releasing_enzyme
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.4.19.1 EC-3.4.19.1]
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** 3810
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* centisome position:
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** 59.189064   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
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** 1 [[N-Ac-L-methionyl-L-glutaminyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Glutaminyl-Peptides]][c] '''+''' 1 [[CPD0-2015]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 an N-terminal Nα-acetyl-L-methionyl-L-glutaminyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 an N-terminal L-glutaminyl-[protein][c] '''+''' 1 Nα-acetyl-L-methionine[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-16425]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_3550]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-16426]]
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* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7799 PWY-7799]
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** '''8''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-5514]]
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* [[PWY-6906]]
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* [[UDPNACETYLGALSYN-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5508}}
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{{#set: common name=acylamino-acid-releasing_enzyme}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-3.4.19.1}}
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{{#set: left end position=3810}}
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{{#set: gene associated=Tiso_gene_3550}}
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{{#set: centisome position=59.189064    }}
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{{#set: in pathway=PWY-7799}}
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{{#set: reaction associated=PHOSACETYLGLUCOSAMINEMUT-RXN|RXN-16425|RXN-16426}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5514|PWY-6906|UDPNACETYLGALSYN-PWY}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:46, 21 March 2018

Gene Tiso_gene_13230

  • right end position:
    • 5508
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3810
  • centisome position:
    • 59.189064
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBULOKIN-RXN&oldid=36216"