Difference between revisions of "RXN-11058"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_2983 == * left end position: ** 12463 * transcription direction: ** NEGATIVE * right end position: ** 17278 * centisome position: ** 70.028...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamyl-tRNA(Gln) amid...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_2983 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] ==
−
* left end position:
+
* direction:
−
** 12463
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** Glutamyl-tRNA(Gln) amidotransferase subunit A
−
* right end position:
+
* ec number:
−
** 17278
+
** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
−
* centisome position:
+
−
** 70.028656   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-12086]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[ATP]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c]
−
***ec-number
+
* With common name(s):
−
* [[RXN-12579]]
+
** 1 ATP[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 H+[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 L-glutamate[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_9908]]
−
***ec-number
+
** Source: [[orthology-esiliculosus]]
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_12219]]
−
* [[LIPAS-PWY]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[PWY-6857]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=12463}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
−
{{#set: right end position=17278}}
+
* LIGAND-RXN:
−
{{#set: centisome position=70.028656    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
−
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
+
{{#set: common name=Glutamyl-tRNA(Gln) amidotransferase subunit A}}
 +
{{#set: ec number=EC-6.3.5.6}}
 +
{{#set: gene associated=Tiso_gene_9908|Tiso_gene_12219}}
 +
{{#set: in pathway=PWY490-4}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:48, 21 March 2018

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamyl-tRNA(Gln) amidotransferase subunit A
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 H2O[c] + 1 L-glutamine[c] => 1 H+[c] + 1 an L-asparaginyl-[tRNAasn][c] + 1 phosphate[c] + 1 ADP[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11058&oldid=36359"