Difference between revisions of "ADEC"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MMUM-RXN MMUM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http://e...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-NADH-RXN GLUTAMATE-SYNTHASE-NADH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MMUM-RXN MMUM-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.1.14 EC-1.4.1.14]
+
** [http://enzyme.expasy.org/EC/2.1.1.10 EC-2.1.1.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[NAD]][c] '''+''' 2 [[GLT]][c]
+
** 1 [[HOMO-CYS]][c] '''+''' 1 [[CPD-397]][c] '''=>''' 2 [[MET]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 L-glutamine[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 NAD+[c] '''+''' 2 L-glutamate[c]
+
** 1 L-homocysteine[c] '''+''' 1 S-methyl-L-methionine[c] '''=>''' 2 L-methionine[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2581]]
+
* Gene: [[Tiso_gene_5515]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_1154]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_11511]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=GLUGLNSYN-PWY GLUGLNSYN-PWY]
+
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine: [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSCAT-PWY ADENOSYLHOMOCYSCAT-PWY]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
+
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5441]], S-methyl-L-methionine cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5441 PWY-5441]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
+
* Category: [[annotation]]
−
** Source: [[manual-primary_network]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13753 13753]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26337 26337]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
+
−
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
+
−
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
+
−
** [http://www.uniprot.org/uniprot/O61143 O61143]
+
−
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
+
−
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.4.1.14}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_2581|Tiso_gene_1154|Tiso_gene_11511}}
+
{{#set: ec number=EC-2.1.1.10}}
−
{{#set: in pathway=GLUGLNSYN-PWY|PWY-6963}}
+
{{#set: gene associated=Tiso_gene_5515}}
−
{{#set: reconstruction category=orthology|manual}}
+
{{#set: in pathway=ADENOSYLHOMOCYSCAT-PWY|PWY-702|PWY-5441}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|manual-primary_network|orthology-esiliculosus|orthology-synechocystis}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:48, 21 March 2018

Reaction MMUM-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-homocysteine[c] + 1 S-methyl-L-methionine[c] => 2 L-methionine[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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