Difference between revisions of "Tiso gene 2449"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.74-RXN 3.1.3.74-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_9870 == * right end position: ** 3486 * transcription direction: ** NEGATIVE * left end position: ** 278 * centisome position: ** 3.0882027...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.74-RXN 3.1.3.74-RXN] ==
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== Gene Tiso_gene_9870 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3486
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.1.3.74 EC-3.1.3.74]
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** NEGATIVE
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* left end position:
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** 278
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* centisome position:
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** 3.0882027   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN1F-20]]
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** 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[PYRIDOXAL]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 pyridoxal 5'-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 pyridoxal[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_18054]]
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== Pathways associated ==
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-5531]]
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== Pathways ==
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* [[CHLOROPHYLL-SYN]]
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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* [[PWY-7159]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=3486}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00173 R00173]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=278}}
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{{#set: ec number=EC-3.1.3.74}}
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{{#set: centisome position=3.0882027    }}
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{{#set: gene associated=Tiso_gene_18054}}
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{{#set: reaction associated=RXN1F-20}}
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{{#set: in pathway=PWY-7204}}
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{{#set: pathway associated=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:48, 21 March 2018

Gene Tiso_gene_9870

  • right end position:
    • 3486
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 278
  • centisome position:
    • 3.0882027
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2449&oldid=36398"