Difference between revisions of "UDPACYLGLCNACDEACETYL-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional_c...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** threonine_alanine_trna_ligase_subfamily_protein
+
** bifunctional_chorismate_mutase_prephenate_dehydratase
−
** ORF
+
−
** alanyl-trna_synthetase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.7 EC-6.1.1.7]
+
** [http://enzyme.expasy.org/EC/5.4.99.5 EC-5.4.99.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ALA-tRNAs]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ALA-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNAala[c] '''+''' 1 L-alanine[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-alanyl-[tRNAala][c] '''+''' 1 AMP[c]
+
** 1 chorismate[c] '''<=>''' 1 prephenate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2298]]
+
* Gene: [[Tiso_gene_5940]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_3249]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18607]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18609]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_19573]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
 +
** '''1''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12540 12540]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P56452 P56452]
+
** [http://www.uniprot.org/uniprot/P19080 P19080]
−
** [http://www.uniprot.org/uniprot/O27718 O27718]
+
** [http://www.uniprot.org/uniprot/P27603 P27603]
−
** [http://www.uniprot.org/uniprot/O34526 O34526]
+
** [http://www.uniprot.org/uniprot/P32178 P32178]
−
** [http://www.uniprot.org/uniprot/P47534 P47534]
+
** [http://www.uniprot.org/uniprot/P43900 P43900]
−
** [http://www.uniprot.org/uniprot/O58035 O58035]
+
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
−
** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
+
** [http://www.uniprot.org/uniprot/P21204 P21204]
−
** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
+
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
−
** [http://www.uniprot.org/uniprot/Q57984 Q57984]
+
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
−
** [http://www.uniprot.org/uniprot/O51238 O51238]
+
** [http://www.uniprot.org/uniprot/P43902 P43902]
−
** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
+
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
−
** [http://www.uniprot.org/uniprot/O83980 O83980]
+
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
−
** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
+
** [http://www.uniprot.org/uniprot/P07023 P07023]
−
** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
+
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
−
** [http://www.uniprot.org/uniprot/O67323 O67323]
+
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
−
** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
+
** [http://www.uniprot.org/uniprot/P42738 P42738]
−
** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
+
** [http://www.uniprot.org/uniprot/O22409 O22409]
−
** [http://www.uniprot.org/uniprot/P49588 P49588]
+
** [http://www.uniprot.org/uniprot/O22410 O22410]
−
** [http://www.uniprot.org/uniprot/P43815 P43815]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P50475 P50475]
+
{{#set: common name=bifunctional_chorismate_mutase_prephenate_dehydratase}}
−
** [http://www.uniprot.org/uniprot/P24075 P24075]
+
{{#set: ec number=EC-5.4.99.5}}
−
** [http://www.uniprot.org/uniprot/P27866 P27866]
+
{{#set: gene associated=Tiso_gene_5940}}
−
** [http://www.uniprot.org/uniprot/P35029 P35029]
+
{{#set: in pathway=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|TYRSYN|PWY-6627}}
−
** [http://www.uniprot.org/uniprot/P40825 P40825]
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
** [http://www.uniprot.org/uniprot/P75368 P75368]
+
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|orthology-creinhardtii|orthology-athaliana|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/Q48976 Q48976]
+
−
** [http://www.uniprot.org/uniprot/P00957 P00957]
+
−
** [http://www.uniprot.org/uniprot/P21894 P21894]
+
−
** [http://www.uniprot.org/uniprot/O50189 O50189]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=threonine_alanine_trna_ligase_subfamily_protein}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=alanyl-trna_synthetase}}
+
−
{{#set: ec number=EC-6.1.1.7}}
+
−
{{#set: gene associated=Tiso_gene_2298|Tiso_gene_3249|Tiso_gene_18607|Tiso_gene_18609|Tiso_gene_19573}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:49, 21 March 2018

Reaction CHORISMATEMUT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • bifunctional_chorismate_mutase_prephenate_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chorismate[c] <=> 1 prephenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120, L-tyrosine biosynthesis III: PWY-6120
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3462, L-phenylalanine biosynthesis II: PWY-3462
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3461, L-tyrosine biosynthesis II: PWY-3461
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7626, bacilysin biosynthesis: PWY-7626
    • 1 reactions found over 10 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6627, salinosporamide A biosynthesis: PWY-6627
    • 1 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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