Difference between revisions of "PHE"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11409 RXN-11409] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13158 RXN-13158] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydroge...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13158 RXN-13158] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** 3-isopropylmalate dehydrogenase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 (2R,3S)-3-isopropylmalate[c] '''+''' 1 NAD+[c] '''=>''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 NADH[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_2920]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[manual]] | ||
| + | ** Source: [[manual-primary_network]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-experimental_annotation]] | ** Source: [[annotation-experimental_annotation]] | ||
| − | |||
| − | |||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32272 32272] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: in pathway= | + | {{#set: common name=3-isopropylmalate dehydrogenase}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: ec number=EC-1.1.1.85}} |
| − | {{#set: reconstruction source=annotation-experimental_annotation| | + | {{#set: gene associated=Tiso_gene_2920}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: in pathway=}} |
| + | {{#set: reconstruction category=orthology|manual|annotation}} | ||
| + | {{#set: reconstruction source=manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:51, 21 March 2018
Contents
Reaction RXN-13158
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-isopropylmalate dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE[c] + 1 NAD[c] => 1 2K-4CH3-PENTANOATE[c] + 1 NADH[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 (2R,3S)-3-isopropylmalate[c] + 1 NAD+[c] => 1 4-methyl-2-oxopentanoate[c] + 1 NADH[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2920
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-experimental_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
