Difference between revisions of "TPH"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_1843 == * left end position: ** 13606 * transcription direction: ** NEGATIVE * right end position: ** 16045 * centisome position: ** 63.189...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11347 RXN-11347] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11347 RXN-11347] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** ORF |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[CPD-12258]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[CPD-12303]][c] |
| − | ** | + | * With common name(s): |
| − | ** [[ | + | ** 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine[c] '''+''' 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''=>''' 1 UMP[c] '''+''' 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine[c] |
| − | == Pathways | + | |
| − | * [[ | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| + | * Gene: [[Tiso_gene_1604]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PWY-6470]], peptidoglycan biosynthesis V (β-lactam resistance): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6470 PWY-6470] | ||
| + | ** '''2''' reactions found over '''11''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=ORF}} |
| − | {{#set: | + | {{#set: ec number=EC-2.7.8.13}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_1604}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6470}} |
| − | {{#set: | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:52, 21 March 2018
Contents
Reaction RXN-11347
- direction:
- LEFT-TO-RIGHT
- common name:
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine[c] + 1 di-trans,octa-cis-undecaprenyl phosphate[c] => 1 UMP[c] + 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_1604
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-6470, peptidoglycan biosynthesis V (β-lactam resistance): PWY-6470
- 2 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
