Difference between revisions of "Tiso gene 19475"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polypeptide_deformyla...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14382 RXN-14382] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14382 RXN-14382] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polypeptide_deformylase
+
** cysteine_mitochondrial
−
* ec number:
+
** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
−
** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Charged-fMET-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c]
+
** 1 [[Sulfur-Carrier-Proteins-ThiI]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurylated-ThiI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-formyl-L-methionylaminoacyl-tRNA[c] '''+''' 1 H2O[c] '''=>''' 1 a L-methionylaminoacyl-tRNA[c] '''+''' 1 H+[c] '''+''' 1 formate[c]
+
** 1 a ThiI sulfur-carrier protein[c] '''+''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''=>''' 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 an S-sulfanyl-[ThiI sulfur-carrier protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14998]]
+
* Gene: [[Tiso_gene_14710]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11478]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4284]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P44786 P44786]
 
−
** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polypeptide_deformylase}}
+
{{#set: common name=cysteine_mitochondrial}}
−
{{#set: ec number=EC-3.5.1.88}}
+
{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
−
{{#set: gene associated=Tiso_gene_14998}}
+
{{#set: gene associated=Tiso_gene_14710|Tiso_gene_11478|Tiso_gene_4284}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6892}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:52, 21 March 2018

Reaction RXN-14382

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19475&oldid=36919"