Difference between revisions of "Tiso gene 17314"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5841 RXN-5841] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_-nucleotidase ** 5_deoxy_cy...")
(Created page with "Category:Gene == Gene Tiso_gene_8216 == * right end position: ** 3586 * transcription direction: ** NEGATIVE * left end position: ** 2455 * centisome position: ** 23.52434...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5841 RXN-5841] ==
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== Gene Tiso_gene_8216 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3586
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* common name:
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* transcription direction:
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** 5_-nucleotidase
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** NEGATIVE
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** 5_deoxy_cytosolic_type_c_protein
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* left end position:
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** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** 2455
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** ORF
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* centisome position:
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* ec number:
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** 23.52434   
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''=>''' 1 [[NICOTINAMIDE_RIBOSE]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 β-nicotinamide D-ribonucleotide[c] '''=>''' 1 1-(β-D ribofuranosyl)nicotinamide[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5911]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6988]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13929]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14434]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14246]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6640]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14435]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3586}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30815 30815]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2455}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02323 R02323]
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{{#set: centisome position=23.52434    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: common name=5_-nucleotidase}}
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{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_5911|Tiso_gene_6988|Tiso_gene_13929|Tiso_gene_14434|Tiso_gene_14246|Tiso_gene_6640|Tiso_gene_14435}}
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{{#set: in pathway=PWY-5381|NAD-BIOSYNTHESIS-II}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:53, 21 March 2018

Gene Tiso_gene_8216

  • right end position:
    • 3586
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2455
  • centisome position:
    • 23.52434
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17314&oldid=37053"