Difference between revisions of "Tiso gene 17795"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4178 RXNQT-4178] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydro...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4178 RXNQT-4178] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-isopropylmalate dehydrogenase
 
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85]
+
** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CPDQT-40]][c] '''=>''' 1 [[CPDQT-41]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-474]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CPD-520]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 3-(7'-methylthio)heptylmalate[c] '''=>''' 1 10-(methylthio)-2-oxodecanoate[c] '''+''' 1 NADH[c] '''+''' 1 CO2[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 (+)-taxifolin[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 H2O[c] '''+''' 1 succinate[c] '''+''' 1 quercetin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2920]]
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* Gene: [[Tiso_gene_3330]]
−
** EXPERIMENTAL_ANNOTATION
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** Source: [[orthology-athaliana]]
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***EC-NUMBER
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** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5390]], rutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08646 R08646]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02160 R02160]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-isopropylmalate dehydrogenase}}
+
{{#set: ec number=EC-1.14.11.23}}
−
{{#set: ec number=EC-1.1.1.85}}
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{{#set: gene associated=Tiso_gene_3330}}
−
{{#set: gene associated=Tiso_gene_2920}}
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{{#set: in pathway=PWY-3101|PWY-5390|PWY-6787}}
−
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-experimental_annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:53, 21 March 2018

Reaction RXN-527

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3101, flavonol biosynthesis: PWY-3101
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5390, rutin biosynthesis: PWY-5390
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




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