Difference between revisions of "ACCOAtx"

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(Created page with "Category:Gene == Gene Tiso_gene_16028 == * left end position: ** 1941 * transcription direction: ** POSITIVE * right end position: ** 3492 * centisome position: ** 41.8228...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4210 RXN-4210] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_16028 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4210 RXN-4210] ==
* left end position:
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* direction:
** 1941
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/1.3.1.21 EC-1.3.1.21]
* right end position:
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** 3492
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* centisome position:
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** 41.822884   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[PEROXID-RXN]]
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* With identifiers:
** [[pantograph]]-[[esiliculosus]]
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** 1 [[CPD-4126]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-4127]][c]
* [[RXN-12440]]
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* With common name(s):
** in-silico_annotation
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** 1 5-dehydroavenasterol[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 isofucosterol[c]
***automated-name-match
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* [[RXN-14240]]
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== Genes associated with this reaction  ==
** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
* [[RXN-15288]]
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* Gene: [[Tiso_gene_8982]]
** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
* [[RXN-3521]]
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== Pathways  ==
** in-silico_annotation
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
***automated-name-match
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** '''10''' reactions found over '''36''' reactions in the full pathway
* [[RXN-8635]]
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== Reconstruction information  ==
** [[pantograph]]-[[esiliculosus]]
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* Category: [[orthology]]
== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
* [[PWY-7214]]
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*** Tool: [[pantograph]]
* [[PWY-6959]]
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* [[PWY-5461]]
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* [[PWY-7445]]
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* [[PWY-6960]]
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* [[PWY-6961]]
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* [[PWY-2261]]
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== External links  ==
 
== External links  ==
{{#set: left end position=1941}}
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* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07487 R07487]
{{#set: right end position=3492}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=41.822884    }}
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{{#set: ec number=EC-1.3.1.21}}
{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-3521|RXN-8635}}
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{{#set: gene associated=Tiso_gene_8982}}
{{#set: pathway associated=PWY-7214|PWY-6959|PWY-5461|PWY-7445|PWY-6960|PWY-6961|PWY-2261}}
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{{#set: in pathway=PWY-2541}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 15:53, 21 March 2018

Reaction RXN-4210

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-dehydroavenasterol[c] + 1 H+[c] + 1 NADPH[c] => 1 NADP+[c] + 1 isofucosterol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 10 reactions found over 36 reactions in the full pathway

Reconstruction information

External links