Difference between revisions of "PSEUDOURIDINE-5-P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADDALT-RXN ADDALT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** aldo-keto_reductase_famil...")
(Created page with "Category:Gene == Gene Tiso_gene_1610 == * right end position: ** 22757 * transcription direction: ** POSITIVE * left end position: ** 33 * centisome position: ** 0.1441677...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADDALT-RXN ADDALT-RXN] ==
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== Gene Tiso_gene_1610 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 22757
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* common name:
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* transcription direction:
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** aldo-keto_reductase_family_4_member_c9_isoform_x2
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 33
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** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
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* centisome position:
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** 0.14416775   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[DEOXYADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DEOXYINOSINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 2'-deoxyadenosine[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 2'-deoxyinosine[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_19373]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_18322]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN0-5462]]
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7179]], purine deoxyribonucleosides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7179 PWY-7179]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7179-1]], purine deoxyribonucleosides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7179-1 PWY-7179-1]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=22757}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28190 28190]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=33}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02556 R02556]
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{{#set: centisome position=0.14416775    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: common name=aldo-keto_reductase_family_4_member_c9_isoform_x2}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.5.4.4}}
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{{#set: gene associated=Tiso_gene_19373|Tiso_gene_18322}}
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{{#set: in pathway=PWY-7179|PWY-7179-1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:53, 21 March 2018

Gene Tiso_gene_1610

  • right end position:
    • 22757
  • transcription direction:
    • POSITIVE
  • left end position:
    • 33
  • centisome position:
    • 0.14416775
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PSEUDOURIDINE-5-P&oldid=37146"