Difference between revisions of "RXN-12197"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12231 CPD-12231] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC...")
(Created page with "Category:Gene == Gene Tiso_gene_19962 == * right end position: ** 1257 * transcription direction: ** POSITIVE * left end position: ** 1070 * centisome position: ** 56.7639...")
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12231 CPD-12231] ==
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== Gene Tiso_gene_19962 ==
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* smiles:
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* right end position:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC4(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(OC3(OC(CO)C(OC2(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(OC1(OC(CO)C(O)C(O)C(NC(=O)C)1))C(CO)O2))C(O)C(NC(=O)C)3))C(CO)O4))([O-])=O)C)C)C)C)C)C)C
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** 1257
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* inchi key:
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* transcription direction:
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** InChIKey=YCEYFMFATQTSRQ-CLOLGSKGSA-H
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** POSITIVE
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* common name:
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* left end position:
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** a peptidoglycan dimer (meso-diaminopimelate containing)
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** 1070
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* molecular weight:
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* centisome position:
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** 2907.201    
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** 56.763924    
 
* Synonym(s):
 
* Synonym(s):
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** [N-acetylglucosamine-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine]2 diphospho-undecaprenyl
 
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[RXN-11302]]
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* Reaction: [[TRIOSEPISOMERIZATION-RXN]]
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== Reaction(s) known to produce the compound ==
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) of unknown directionality ==
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY66-399]]
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* [[P185-PWY]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6142]]
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* [[CALVIN-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY66-373]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: right end position=1257}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657721 90657721]
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{{#set: transcription direction=POSITIVE}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC4(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(OC3(OC(CO)C(OC2(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(OC1(OC(CO)C(O)C(O)C(NC(=O)C)1))C(CO)O2))C(O)C(NC(=O)C)3))C(CO)O4))([O-])=O)C)C)C)C)C)C)C}}
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{{#set: left end position=1070}}
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{{#set: inchi key=InChIKey=YCEYFMFATQTSRQ-CLOLGSKGSA-H}}
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{{#set: centisome position=56.763924    }}
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{{#set: common name=a peptidoglycan dimer (meso-diaminopimelate containing)}}
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{{#set: reaction associated=TRIOSEPISOMERIZATION-RXN}}
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{{#set: molecular weight=2907.201    }}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|P185-PWY|GLUCONEO-PWY|GLYCOLYSIS|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|PWY66-373|PWY-7003}}
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{{#set: common name=[N-acetylglucosamine-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine]2 diphospho-undecaprenyl}}
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{{#set: consumed by=RXN-11302}}
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Revision as of 15:54, 21 March 2018

Gene Tiso_gene_19962

  • right end position:
    • 1257
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1070
  • centisome position:
    • 56.763924
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12197&oldid=37203"