Difference between revisions of "2.6.1.7-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-653 CPD-653] == * smiles: ** C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uridine_kinase *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-653 CPD-653] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] ==
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* smiles:
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* direction:
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** C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L
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* common name:
 
* common name:
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** (S)-NADHX
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** uridine_kinase
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* molecular weight:
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* ec number:
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** 681.445   
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** [http://enzyme.expasy.org/EC/2.7.1.48 EC-2.7.1.48]
 
* Synonym(s):
 
* Synonym(s):
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** (6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-12753]]
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** 1 [[URIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 uridine[c] '''+''' 1 ATP[c] '''=>''' 1 UMP[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14474]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203523 25203523]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=64074 64074]
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** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C04856 C04856]
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** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
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* HMDB : HMDB59644
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** [http://www.uniprot.org/uniprot/P47622 P47622]
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{{#set: smiles=C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)}}
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** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
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{{#set: inchi key=InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L}}
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** [http://www.uniprot.org/uniprot/P44533 P44533]
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{{#set: common name=(S)-NADHX}}
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** [http://www.uniprot.org/uniprot/P27515 P27515]
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{{#set: molecular weight=681.445    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=(6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide}}
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{{#set: common name=uridine_kinase}}
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{{#set: produced by=RXN-12753}}
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{{#set: ec number=EC-2.7.1.48}}
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{{#set: gene associated=Tiso_gene_14474}}
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{{#set: in pathway=PWY-7193}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:56, 21 March 2018

Reaction URIDINEKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • uridine_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uridine[c] + 1 ATP[c] => 1 UMP[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7193, pyrimidine ribonucleosides salvage I: PWY-7193
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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