Difference between revisions of "TRANS-RXN-21"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-B5-REDUCTASE-RXN CYTOCHROME-B5-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE] == * smiles: ** C(OP([...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTOCHROME-B5-REDUCTASE-RXN CYTOCHROME-B5-REDUCTASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C(N)=C(C(=O)NC(C([O-])=O)CC([O-])=O)N=C1))O2)
 
* common name:
 
* common name:
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** nadh-cytochrome_b5reductase
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** 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
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** ORF
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* inchi key:
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** cytochrome_b5_reductase
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** InChIKey=NAQGHJTUZRHGAC-LBGUGVGYSA-J
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.6.2.2 EC-1.6.2.2]
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** 450.255   
 
* Synonym(s):
 
* Synonym(s):
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** (S)-2-[5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate
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** 1-(5-phosphoribosyl)-4-(N-succino-carboxamide)-5-aminoimidazole
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** 5'-P-ribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
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** 5'-p-Ribosyl-4-(N-succinocarboxamide)-5-amino imidazole
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** 1-(5'-phosphoribosyl)-4-(N-succino-carboxamide)-5-aminoimidazole
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** SAICAR
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADH]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c]
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* [[SAICARSYN-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NADH[c] '''+''' 2 a ferricytochrome b5[c] '''=>''' 1 NAD+[c] '''+''' 1 H+[c] '''+''' 2 a ferrocytochrome b5[c]
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* [[AIAL]]
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* [[AICARSYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7152]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19905]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8773]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6189]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* BIGG : 25aics
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** [http://www.genome.jp/dbget-bin/www_bget?R00100 R00100]
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266647 45266647]
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** [http://www.uniprot.org/uniprot/P07514 P07514]
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* HMDB : HMDB00797
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** [http://www.uniprot.org/uniprot/P00387 P00387]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P20070 P20070]
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** [http://www.genome.jp/dbget-bin/www_bget?C04823 C04823]
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** [http://www.uniprot.org/uniprot/P36060 P36060]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P38626 P38626]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58443 58443]
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** [http://www.uniprot.org/uniprot/O13809 O13809]
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* METABOLIGHTS : MTBLC58443
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** [http://www.uniprot.org/uniprot/Q9ZNT1 Q9ZNT1]
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{{#set: smiles=C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C(N)=C(C(=O)NC(C([O-])=O)CC([O-])=O)N=C1))O2)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole}}
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{{#set: common name=nadh-cytochrome_b5reductase}}
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{{#set: inchi key=InChIKey=NAQGHJTUZRHGAC-LBGUGVGYSA-J}}
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{{#set: common name=ORF}}
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{{#set: molecular weight=450.255    }}
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{{#set: common name=cytochrome_b5_reductase}}
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{{#set: common name=(S)-2-[5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate|1-(5-phosphoribosyl)-4-(N-succino-carboxamide)-5-aminoimidazole|5'-P-ribosyl-4-(N-succinocarboxamide)-5-aminoimidazole|5'-p-Ribosyl-4-(N-succinocarboxamide)-5-amino imidazole|1-(5'-phosphoribosyl)-4-(N-succino-carboxamide)-5-aminoimidazole|SAICAR}}
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{{#set: ec number=EC-1.6.2.2}}
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{{#set: produced by=SAICARSYN-RXN}}
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{{#set: gene associated=Tiso_gene_7152|Tiso_gene_19905|Tiso_gene_8773|Tiso_gene_6189}}
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{{#set: reversible reaction associated=AIAL|AICARSYN-RXN}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:59, 21 March 2018

Metabolite P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE

  • smiles:
    • C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C(N)=C(C(=O)NC(C([O-])=O)CC([O-])=O)N=C1))O2)
  • common name:
    • 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
  • inchi key:
    • InChIKey=NAQGHJTUZRHGAC-LBGUGVGYSA-J
  • molecular weight:
    • 450.255
  • Synonym(s):
    • (S)-2-[5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate
    • 1-(5-phosphoribosyl)-4-(N-succino-carboxamide)-5-aminoimidazole
    • 5'-P-ribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
    • 5'-p-Ribosyl-4-(N-succinocarboxamide)-5-amino imidazole
    • 1-(5'-phosphoribosyl)-4-(N-succino-carboxamide)-5-aminoimidazole
    • SAICAR

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : 25aics
  • PUBCHEM:
  • HMDB : HMDB00797
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC58443
"C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C(N)=C(C(=O)NC(C([O-])=O)CC([O-])=O)N=C1))O2)" cannot be used as a page name in this wiki.


"(S)-2-[5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate" cannot be used as a page name in this wiki.


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