Difference between revisions of "Tiso gene 416"

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(Created page with "Category:Gene == Gene Tiso_gene_11850 == * left end position: ** 5768 * transcription direction: ** NEGATIVE * right end position: ** 7441 * centisome position: ** 77.1019...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-l...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11850 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN] ==
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* left end position:
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* direction:
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** 5768
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** ca2+-activated_spot-like_protein
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* right end position:
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* ec number:
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** 7441
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** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2]
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* centisome position:
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** 77.10199   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.1.1.143-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[GUANOSINE-5DP-3DP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-4021]]
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** 1 H2O[c] '''+''' 1 ppGpp[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 GDP[c]
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** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_6799]]
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* [[PWY-2541]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7155]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5768}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14253 14253]
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{{#set: right end position=7441}}
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* LIGAND-RXN:
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{{#set: centisome position=77.10199    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00336 R00336]
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{{#set: reaction associated=2.1.1.143-RXN|RXN-4021}}
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* UNIPROT:
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{{#set: pathway associated=PWY-2541|PWY-7155}}
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** [http://www.uniprot.org/uniprot/Q9PN26 Q9PN26]
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** [http://www.uniprot.org/uniprot/Q9JT97 Q9JT97]
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** [http://www.uniprot.org/uniprot/P43811 P43811]
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** [http://www.uniprot.org/uniprot/P0AG24 P0AG24]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ca2+-activated_spot-like_protein}}
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{{#set: ec number=EC-3.1.7.2}}
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{{#set: gene associated=Tiso_gene_6799}}
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{{#set: in pathway=PPGPPMET-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:59, 21 March 2018

Reaction PPGPPSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ca2+-activated_spot-like_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 ppGpp[c] => 1 diphosphate[c] + 1 H+[c] + 1 GDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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