Difference between revisions of "CPD-5162"

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(Created page with "Category:Gene == Gene Tiso_gene_4976 == * left end position: ** 8336 * transcription direction: ** NEGATIVE * right end position: ** 14013 * centisome position: ** 59.1835...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-stearoyl-[acyl-carrier...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4976 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] ==
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* left end position:
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* direction:
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** 8336
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 3-oxo-stearoyl-[acyl-carrier protein] reductase
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* right end position:
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** polyketide_synthase
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** 14013
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** 3-oxoacyl-(acyl-carrier-protein)
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* centisome position:
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* ec number:
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** 59.183525   
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[6.3.4.16-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[R-3-hydroxystearoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
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* [[CARBPSYN-RXN]]
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* With common name(s):
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** in-silico_annotation
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** 1 a 3-oxo-stearoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 a (3R)-3-hydroxystearoyl-[acp][c] '''+''' 1 NADP+[c]
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***ec-number
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* [[GLUTAMIN-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_10876]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-13202]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_9885]]
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***ec-number
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-14196]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_136]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-16909]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_135]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-16910]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_500]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[PWY-4984]]
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* Gene: [[Tiso_gene_13394]]
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* [[GLUTAMINDEG-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ARGSYN-PWY]]
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*** Assignment: EC-NUMBER
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* [[PWY-5154]]
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* Gene: [[Tiso_gene_13083]]
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* [[PWY-7790]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ARGSYNBSUB-PWY]]
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*** Assignment: EC-NUMBER
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* [[PWY-7693]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-7400]]
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*** Assignment: EC-NUMBER
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* [[PWY-7791]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-5686]]
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== Pathways ==
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* [[CITRULBIO-PWY]]
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* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=8336}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-oxo-stearoyl-[acyl-carrier protein] reductase}}
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{{#set: right end position=14013}}
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{{#set: common name=polyketide_synthase}}
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{{#set: centisome position=59.183525    }}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: reaction associated=6.3.4.16-RXN|CARBPSYN-RXN|GLUTAMIN-RXN|RXN-13202|RXN-14196|RXN-16909|RXN-16910}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: pathway associated=PWY-4984|GLUTAMINDEG-PWY|ARGSYN-PWY|PWY-5154|PWY-7790|ARGSYNBSUB-PWY|PWY-7693|PWY-7400|PWY-7791|PWY-5686|CITRULBIO-PWY}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: gene associated=Tiso_gene_10876|Tiso_gene_9885|Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_13083}}
 +
{{#set: in pathway=PWY-5989|PWY3O-355}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:00, 21 March 2018

Reaction RXN-9633

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-stearoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
    • 5 reactions found over 6 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxo-stearoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.





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