Difference between revisions of "CPD-14736"

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(Created page with "Category:Gene == Gene Tiso_gene_1537 == * left end position: ** 149 * transcription direction: ** POSITIVE * right end position: ** 1729 * centisome position: ** 0.6363442...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.5...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1537 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] ==
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* left end position:
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* direction:
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** 149
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** REVERSIBLE
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
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* right end position:
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** 1729
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* centisome position:
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** 0.6363442   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.1.1.64-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''<=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 isopentenyl diphosphate[c] '''+''' 1 (2E,6E)-farnesyl diphosphate[c] '''<=>''' 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] '''+''' 1 diphosphate[c]
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* [[CARBOXYLESTERASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_2848]]
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Source: [[orthology-athaliana]]
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***automated-name-match
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* Gene: [[Tiso_gene_8531]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-athaliana]]
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* [[RXN-10711]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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* Gene: [[Tiso_gene_18201]]
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***automated-name-match
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_10317]]
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* [[RXN-10767]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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* Gene: [[Tiso_gene_11582]]
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***automated-name-match
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RXN-12252]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[orthology]]
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***automated-name-match
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** Tool: [[pantograph]]
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* [[RXN-12575]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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*** Tool: [[pantograph]]
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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−
* [[RXNQT-4366]]
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** in-silico_annotation
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=149}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
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{{#set: right end position=1729}}
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* LIGAND-RXN:
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{{#set: centisome position=0.6363442    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: ec number=EC-2.5.1}}
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{{#set: gene associated=Tiso_gene_2848|Tiso_gene_8531|Tiso_gene_18201|Tiso_gene_10317|Tiso_gene_11582}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:00, 21 March 2018

Reaction RXN0-5180

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 isopentenyl diphosphate[c] + 1 (2E,6E)-farnesyl diphosphate[c] <=> 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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