Difference between revisions of "RXN0-5180"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8653 CPD-8653] == * smiles: ** C(=[N+]1(C(C([O-])=O)CC2(=C1C=C(O)C(O)=C2)))C=C3(C=C(C(=O)[O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8653 CPD-8653] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C(=[N+]1(C(C([O-])=O)CC2(=C1C=C(O)C(O)=C2)))C=C3(C=C(C(=O)[O-])NC(C([O-])=O)C3)
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/4.1.2.52 EC-4.1.2.52]
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** betanidin
 +
* inchi key:
 +
** InChIKey=XHJKHSXHWJCBLX-AAEUAGOBSA-L
 +
* molecular weight:
 +
** 386.317   
 
* Synonym(s):
 
* Synonym(s):
 +
** betanidin radical
 +
** 2,6-Pyridinedicarboxylic acid
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-8635]]
** 1 [[CPD-804]][c] '''=>''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[PYRUVATE]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 (4S)-4-hydroxy-2-oxoheptanedioate[c] '''=>''' 1 succinate semialdehyde[c] '''+''' 1 pyruvate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13940]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* DRUGBANK : DB00217
** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647]
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* PUBCHEM:
** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245506 25245506]
{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB29407
{{#set: ec number=EC-4.1.2.52}}
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* CHEBI:
{{#set: gene associated=Tiso_gene_13940}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=3079 3079]
{{#set: in pathway=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY}}
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* LIGAND-CPD:
{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C08539 C08539]
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: smiles=C(=[N+]1(C(C([O-])=O)CC2(=C1C=C(O)C(O)=C2)))C=C3(C=C(C(=O)[O-])NC(C([O-])=O)C3)}}
{{#set: reconstruction tool=pantograph}}
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{{#set: common name=betanidin}}
 +
{{#set: inchi key=InChIKey=XHJKHSXHWJCBLX-AAEUAGOBSA-L}}
 +
{{#set: molecular weight=386.317    }}
 +
{{#set: common name=betanidin radical|2,6-Pyridinedicarboxylic acid}}
 +
{{#set: consumed by=RXN-8635}}

Revision as of 17:00, 21 March 2018

Metabolite CPD-8653

  • smiles:
    • C(=[N+]1(C(C([O-])=O)CC2(=C1C=C(O)C(O)=C2)))C=C3(C=C(C(=O)[O-])NC(C([O-])=O)C3)
  • common name:
    • betanidin
  • inchi key:
    • InChIKey=XHJKHSXHWJCBLX-AAEUAGOBSA-L
  • molecular weight:
    • 386.317
  • Synonym(s):
    • betanidin radical
    • 2,6-Pyridinedicarboxylic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=[N+]1(C(C([O-])=O)CC2(=C1C=C(O)C(O)=C2)))C=C3(C=C(C(=O)[O-])NC(C([O-])=O)C3)" cannot be used as a page name in this wiki.