Difference between revisions of "CPD-5881"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13394 == * left end position: ** 235 * transcription direction: ** POSITIVE * right end position: ** 6220 * centisome position: ** 3.716002...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_ami...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** glutamine_amidotransferase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2] |
| − | * | + | |
| − | ** 3. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** | + | ** 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 2 [[PROTON]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 AMP[c] '''+''' 1 GMP[c] '''+''' 2 H+[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | + | * Gene: [[Tiso_gene_6657]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Assignment: EC-NUMBER | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Assignment: EC-NUMBER | |
| − | + | ** Source: [[orthology-athaliana]] | |
| − | + | ** Source: [[orthology-synechocystis]] | |
| − | + | ** Source: [[orthology-esiliculosus]] | |
| − | + | == Pathways == | |
| − | + | * [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] | |
| − | + | ** '''4''' reactions found over '''4''' reactions in the full pathway | |
| − | + | == Reconstruction information == | |
| − | + | * Category: [[orthology]] | |
| − | + | ** Source: [[orthology-athaliana]] | |
| − | + | *** Tool: [[pantograph]] | |
| − | + | ** Source: [[orthology-synechocystis]] | |
| − | + | *** Tool: [[pantograph]] | |
| − | + | ** Source: [[orthology-esiliculosus]] | |
| − | + | *** Tool: [[pantograph]] | |
| − | + | * Category: [[manual]] | |
| − | + | ** Source: [[manual-primary_network]] | |
| − | + | * Category: [[annotation]] | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
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| − | == Pathways | + | |
| − | * [[PWY- | + | |
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== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11680 11680] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P32073 P32073] |
| + | ** [http://www.uniprot.org/uniprot/P49915 P49915] | ||
| + | ** [http://www.uniprot.org/uniprot/O25165 O25165] | ||
| + | ** [http://www.uniprot.org/uniprot/Q58531 Q58531] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49] | ||
| + | ** [http://www.uniprot.org/uniprot/P29727 P29727] | ||
| + | ** [http://www.uniprot.org/uniprot/O66601 O66601] | ||
| + | ** [http://www.uniprot.org/uniprot/P49056 P49056] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60] | ||
| + | ** [http://www.uniprot.org/uniprot/P44335 P44335] | ||
| + | ** [http://www.uniprot.org/uniprot/P38625 P38625] | ||
| + | ** [http://www.uniprot.org/uniprot/P49057 P49057] | ||
| + | ** [http://www.uniprot.org/uniprot/P04079 P04079] | ||
| + | ** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=glutamine_amidotransferase}} | ||
| + | {{#set: ec number=EC-6.3.5.2}} | ||
| + | {{#set: gene associated=Tiso_gene_6657}} | ||
| + | {{#set: in pathway=PWY-7221}} | ||
| + | {{#set: reconstruction category=orthology|manual|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:01, 21 March 2018
Contents
Reaction GMP-SYN-GLUT-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- glutamine_amidotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-glutamine[c] + 1 ATP[c] + 1 H2O[c] + 1 XMP[c] => 1 diphosphate[c] + 1 L-glutamate[c] + 1 AMP[c] + 1 GMP[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6657
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
