Difference between revisions of "Oligonucleotides"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-148 RXN1F-148] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-653 CPD-653] == * smiles: ** C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-148 RXN1F-148] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-653 CPD-653] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
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** (S)-NADHX
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* inchi key:
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** InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L
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* molecular weight:
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** 681.445   
 
* Synonym(s):
 
* Synonym(s):
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** (6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[CPD1F-115]][c] '''=>''' 1 [[CPD1F-118]][c]
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* [[RXN-12753]]
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 δ-carotene[c] '''=>''' 1 α-carotene[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8263]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6282]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_3577]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4457]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_11980]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_1547]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[PWY-5947]], lutein biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5947 PWY-5947]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* PUBCHEM:
** [http://www.genome.jp/dbget-bin/www_bget?R06962 R06962]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203523 25203523]
{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB59644
{{#set: ec number=EC-5.5.1.19}}
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* CHEBI:
{{#set: gene associated=Tiso_gene_8263|Tiso_gene_6282|Tiso_gene_3577|Tiso_gene_4457|Tiso_gene_11980|Tiso_gene_1547}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=64074 64074]
{{#set: in pathway=PWY-5947}}
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* LIGAND-CPD:
{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04856 C04856]
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: smiles=C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)}}
{{#set: reconstruction tool=pantograph}}
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{{#set: common name=(S)-NADHX}}
 +
{{#set: inchi key=InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L}}
 +
{{#set: molecular weight=681.445    }}
 +
{{#set: common name=(6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide}}
 +
{{#set: produced by=RXN-12753}}

Revision as of 16:01, 21 March 2018

Metabolite CPD-653

  • smiles:
    • C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)
  • common name:
    • (S)-NADHX
  • inchi key:
    • InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L
  • molecular weight:
    • 681.445
  • Synonym(s):
    • (6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)" cannot be used as a page name in this wiki.