Difference between revisions of "RXN-17020"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCC ADENYLOSUCC] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=NC=NC=2...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCC ADENYLOSUCC] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=NC=NC=23)NC(CC(=O)[O-])C(=O)[O-])))
 
* common name:
 
* common name:
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** polyketide_synthase
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** adenylo-succinate
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** 3-oxoacyl-synthase
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* inchi key:
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* ec number:
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** InChIKey=OFBHPPMPBOJXRT-DPXQIYNJSA-J
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 459.265   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** N6-(1,2-dicarboxyethyl)-AMP
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** adenylo-succ
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[AAL_fum]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Myristoyl-ACPs]][c] '''=>''' 1 [[3-oxo-palmitoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
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** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 a myristoyl-[acp][c] '''=>''' 1 a 3-oxo-palmitoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
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== Reaction(s) of unknown directionality ==
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* [[AMPSYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 19240-42-7
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{{#set: common name=polyketide_synthase}}
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* BIGG : dcamp
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{{#set: common name=3-oxoacyl-synthase}}
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* PUBCHEM:
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{{#set: ec number=EC-2.3.1.86}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878398 46878398]
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{{#set: ec number=EC-2.3.1.85}}
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* HMDB : HMDB00536
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{{#set: ec number=EC-2.3.1.41}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15991|Tiso_gene_136|Tiso_gene_19302|Tiso_gene_500|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_5939|Tiso_gene_13394|Tiso_gene_14485}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03794 C03794]
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{{#set: in pathway=PWY-5994}}
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* CHEBI:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57567 57567]
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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* METABOLIGHTS : MTBLC57567
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=NC=NC=23)NC(CC(=O)[O-])C(=O)[O-])))}}
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{{#set: common name=adenylo-succinate}}
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{{#set: inchi key=InChIKey=OFBHPPMPBOJXRT-DPXQIYNJSA-J}}
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{{#set: molecular weight=459.265    }}
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{{#set: common name=N6-(1,2-dicarboxyethyl)-AMP|adenylo-succ}}
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{{#set: consumed by=AAL_fum}}
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{{#set: produced by=ADENYLOSUCCINATE-SYNTHASE-RXN}}
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{{#set: reversible reaction associated=AMPSYN-RXN}}

Revision as of 17:01, 21 March 2018

Metabolite ADENYLOSUCC

  • smiles:
    • C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=NC=NC=23)NC(CC(=O)[O-])C(=O)[O-])))
  • common name:
    • adenylo-succinate
  • inchi key:
    • InChIKey=OFBHPPMPBOJXRT-DPXQIYNJSA-J
  • molecular weight:
    • 459.265
  • Synonym(s):
    • N6-(1,2-dicarboxyethyl)-AMP
    • adenylo-succ

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 19240-42-7
  • BIGG : dcamp
  • PUBCHEM:
  • HMDB : HMDB00536
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57567
"C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=NC=NC=23)NC(CC(=O)[O-])C(=O)[O-])))" cannot be used as a page name in this wiki.




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