Difference between revisions of "Tiso gene 4076"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FTHFL FTHFL] == * direction: ** LEFT-TO-RIGHT * common name: ** Formate--tetrahydrofolate ligase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FTHFL FTHFL] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
* ec number:
−
** Formate--tetrahydrofolate ligase
+
** [http://enzyme.expasy.org/EC/2.7.7.24 EC-2.7.7.24]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[FORMATE]][c] '''+''' 1.0 [[ATP]][c] '''+''' 1.0 [[THF]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[10-FORMYL-THF]][c] '''+''' 1.0 [[Pi]][c]
+
** 1 [[TTP]][c] '''+''' 1 [[GLC-1-P]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[DTDP-D-GLUCOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 formate[c] '''+''' 1.0 ATP[c] '''+''' 1.0 tetrahydropteroyl mono-L-glutamate[c] '''=>''' 1.0 ADP[c] '''+''' 1.0 10-formyl-tetrahydrofolate mono-L-glutamate[c] '''+''' 1.0 phosphate[c]
+
** 1 dTTP[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''+''' 1 H+[c] '''<=>''' 1 diphosphate[c] '''+''' 1 dTDP-&alpha;-D-glucose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7582]]
+
* Gene: [[Tiso_gene_14704]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-synechocystis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7301]], dTDP-4-O-demethyl-&beta;-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7657]], dTDP-&beta;-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7312]], dTDP-D-&beta;-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7440]], dTDP-&beta;-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6953]], dTDP-3-acetamido-&alpha;-D-fucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7413]], dTDP-6-deoxy-&alpha;-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7414]], dTDP-&alpha;-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=Formate--tetrahydrofolate ligase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
−
{{#set: gene associated=Tiso_gene_7582}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02328 R02328]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P55256 P55256]
 +
** [http://www.uniprot.org/uniprot/O27819 O27819]
 +
** [http://www.uniprot.org/uniprot/Q58501 Q58501]
 +
** [http://www.uniprot.org/uniprot/P37744 P37744]
 +
** [http://www.uniprot.org/uniprot/P72017 P72017]
 +
** [http://www.uniprot.org/uniprot/P61887 P61887]
 +
** [http://www.uniprot.org/uniprot/P57040 P57040]
 +
** [http://www.uniprot.org/uniprot/P26393 P26393]
 +
** [http://www.uniprot.org/uniprot/P55254 P55254]
 +
** [http://www.uniprot.org/uniprot/P55257 P55257]
 +
** [http://www.uniprot.org/uniprot/P37779 P37779]
 +
** [http://www.uniprot.org/uniprot/P37762 P37762]
 +
** [http://www.uniprot.org/uniprot/Q54143 Q54143]
 +
** [http://www.uniprot.org/uniprot/Q56174 Q56174]
 +
** [http://www.uniprot.org/uniprot/Q51149 Q51149]
 +
** [http://www.uniprot.org/uniprot/P55253 P55253]
 +
** [http://www.uniprot.org/uniprot/O66250 O66250]
 +
** [http://www.uniprot.org/uniprot/O08245 O08245]
 +
** [http://www.uniprot.org/uniprot/Q9RR29 Q9RR29]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.7.7.24}}
 +
{{#set: gene associated=Tiso_gene_14704}}
 +
{{#set: in pathway=PWY-7315|PWY-7316|DTDPRHAMSYN-PWY|PWY-7301|PWY-7657|PWY-7318|PWY-7312|PWY-6942|PWY-7104|PWY-7814|PWY-7440|PWY-6953|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction source=orthology-synechocystis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Revision as of 16:01, 21 March 2018

Reaction DTDPGLUCOSEPP-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dTTP[c] + 1 α-D-glucopyranose 1-phosphate[c] + 1 H+[c] <=> 1 diphosphate[c] + 1 dTDP-α-D-glucose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7315, dTDP-N-acetylthomosamine biosynthesis: PWY-7315
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7316, dTDP-N-acetylviosamine biosynthesis: PWY-7316
    • 2 reactions found over 4 reactions in the full pathway
  • DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis I: DTDPRHAMSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis: PWY-7301
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7657, dTDP-β-L-digitoxose biosynthesis: PWY-7657
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7318, dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: PWY-7318
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7312, dTDP-D-β-fucofuranose biosynthesis: PWY-7312
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6942, dTDP-D-desosamine biosynthesis: PWY-6942
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7104, dTDP-L-megosamine biosynthesis: PWY-7104
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7814, dTDP-L-daunosamine biosynthesis: PWY-7814
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7440, dTDP-β-L-4-epi-vancosamine biosynthesis: PWY-7440
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6953, dTDP-3-acetamido-α-D-fucose biosynthesis: PWY-6953
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6808, dTDP-D-forosamine biosynthesis: PWY-6808
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7413, dTDP-6-deoxy-α-D-allose biosynthesis: PWY-7413
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6976, dTDP-L-mycarose biosynthesis: PWY-6976
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7688, dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: PWY-7688
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6974, dTDP-L-olivose biosynthesis: PWY-6974
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6973, dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: PWY-6973
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-3221, dTDP-L-rhamnose biosynthesis II: PWY-3221
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7414, dTDP-α-D-mycaminose biosynthesis: PWY-7414
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4076&oldid=38182"