Difference between revisions of "ETF-Oxidized"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOADIPATE-ENOL-LACTONASE-RXN 3-OXOADIPATE-ENOL-LACTONASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16622 RXN-16622] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOADIPATE-ENOL-LACTONASE-RXN 3-OXOADIPATE-ENOL-LACTONASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16622 RXN-16622] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** alpha_beta_hydrolase_fold_protein
+
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.24 EC-3.1.1.24]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-OXOADIPATE-ENOL-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-KETO-ADIPATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3R-7Z-3-hydroxy-hexadec-7-enoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (4,5-dihydro-5-oxofuran-2-yl)-acetate[c] '''+''' 1 H2O[c] '''=>''' 1 3-oxoadipate[c] '''+''' 1 H+[c]
+
** 1 NADPH[c] '''+''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R,7Z)-3-hydroxy-hexadec-7-enoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10066]]
+
* Gene: [[Tiso_gene_9885]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13083]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]], protocatechuate degradation II (ortho-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY]
+
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
* [[CATECHOL-ORTHO-CLEAVAGE-PWY]], catechol degradation to β-ketoadipate: [http://metacyc.org/META/NEW-IMAGE?object=CATECHOL-ORTHO-CLEAVAGE-PWY CATECHOL-ORTHO-CLEAVAGE-PWY]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10184 10184]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02991 R02991]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: ec number=EC-3.1.1.24}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: gene associated=Tiso_gene_10066}}
+
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
−
{{#set: in pathway=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY|CATECHOL-ORTHO-CLEAVAGE-PWY}}
+
{{#set: in pathway=PWY-7664}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:02, 21 March 2018

Reaction RXN-16622

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ETF-Oxidized&oldid=38265"