Difference between revisions of "7-AMINOMETHYL-7-DEAZAGUANINE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_829 == * left end position: ** 21934 * transcription direction: ** POSITIVE * right end position: ** 27885 * centisome position: ** 76.7916...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine_synthetase *...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_829 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] ==
−
* left end position:
+
* direction:
−
** 21934
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** asparagine_synthetase
−
* right end position:
+
** asparagine_synthetase_domaincontaining_protein_putat
−
** 27885
+
** aspartate-ammonia_ligase
−
* centisome position:
+
* ec number:
−
** 76.79166   
+
** [http://enzyme.expasy.org/EC/6.3.1.1 EC-6.3.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[5.99.1.3-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[ASN]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
−
***ec-number
+
* With common name(s):
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 L-aspartate[c] '''+''' 1 ATP[c] '''+''' 1 ammonium[c] '''=>''' 1 diphosphate[c] '''+''' 1 L-asparagine[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
−
* [[ATPASE-RXN]]
+
 
−
** in-silico_annotation
+
== Genes associated with this reaction  ==
−
***ec-number
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* Gene: [[Tiso_gene_2973]]
−
** in-silico_annotation
+
** Source: [[annotation-in-silico_annotation]]
−
***ec-number
+
*** Assignment: EC-NUMBER
−
* [[RXN-12195]]
+
** Source: [[annotation-experimental_annotation]]
−
** in-silico_annotation
+
*** Assignment: EC-NUMBER
−
***ec-number
+
** Source: [[orthology-esiliculosus]]
−
* [[RXN-12196]]
+
* Gene: [[Tiso_gene_1462]]
−
** in-silico_annotation
+
** Source: [[annotation-in-silico_annotation]]
−
***ec-number
+
*** Assignment: EC-NUMBER
−
* [[RXN0-5462]]
+
* Gene: [[Tiso_gene_7495]]
−
** in-silico_annotation
+
** Source: [[annotation-in-silico_annotation]]
−
***ec-number
+
*** Assignment: EC-NUMBER
−
== Pathways associated ==
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7184]]
+
== Pathways  ==
−
* [[PWY-7198]]
+
* [[ASPARAGINESYN-PWY]], L-asparagine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINESYN-PWY ASPARAGINESYN-PWY]
−
* [[PWY-6545]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7210]]
+
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=21934}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11372 11372]
−
{{#set: right end position=27885}}
+
* LIGAND-RXN:
−
{{#set: centisome position=76.79166    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00483 R00483]
−
{{#set: reaction associated=5.99.1.3-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
** [http://www.uniprot.org/uniprot/P00963 P00963]
 +
** [http://www.uniprot.org/uniprot/P08243 P08243]
 +
** [http://www.uniprot.org/uniprot/P44338 P44338]
 +
** [http://www.uniprot.org/uniprot/P49088 P49088]
 +
** [http://www.uniprot.org/uniprot/P54264 P54264]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=asparagine_synthetase}}
 +
{{#set: common name=asparagine_synthetase_domaincontaining_protein_putat}}
 +
{{#set: common name=aspartate-ammonia_ligase}}
 +
{{#set: ec number=EC-6.3.1.1}}
 +
{{#set: gene associated=Tiso_gene_2973|Tiso_gene_1462|Tiso_gene_7495}}
 +
{{#set: in pathway=ASPARAGINESYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:03, 21 March 2018

Reaction ASNSYNA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • asparagine_synthetase
    • asparagine_synthetase_domaincontaining_protein_putat
    • aspartate-ammonia_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-aspartate[c] + 1 ATP[c] + 1 ammonium[c] => 1 diphosphate[c] + 1 L-asparagine[c] + 1 AMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=7-AMINOMETHYL-7-DEAZAGUANINE&oldid=38353"