Difference between revisions of "RXN-8975"

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(Created page with "Category:Gene == Gene Tiso_gene_17199 == * left end position: ** 403 * transcription direction: ** NEGATIVE * right end position: ** 2126 * centisome position: ** 10.45124...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] == * direction: ** REVERSIBLE * common name: ** 3-methyl-2-oxobutanoate_de...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17199 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] ==
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* left end position:
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* direction:
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** 403
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** 3-methyl-2-oxobutanoate_dehydrogenase
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* right end position:
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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** 2126
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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** 10.451244   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NADH-DEHYDROG-A-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H+[c] '''<=>''' 1 an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylpropanoyl]dihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-4302]]
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* Gene: [[Tiso_gene_11793]]
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* [[PWY-3781]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6692]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY0-1334]]
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* Gene: [[Tiso_gene_3260]]
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* [[PWY0-1335]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5083]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18084]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
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* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=403}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01701 R01701]
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{{#set: right end position=2126}}
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* UNIPROT:
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{{#set: centisome position=10.451244    }}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: reaction associated=NADH-DEHYDROG-A-RXN}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: pathway associated=PWY-4302|PWY-3781|PWY-6692|PWY0-1334|PWY0-1335|PWY-5083}}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_11793|Tiso_gene_3260|Tiso_gene_18084}}
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{{#set: in pathway=PWY-5046}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:03, 21 March 2018

Reaction 1.2.4.4-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-methyl-2-oxobutanoate_dehydrogenase
    • 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: PWY-5046
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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