Difference between revisions of "RIBONUCLEOSIDE-DIP-REDUCTI-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-5-ADP 3-5-ADP] == * smiles: ** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)OP(=O)([O-])[O-]))O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-5-ADP 3-5-ADP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)OP(=O)([O-])[O-]))OP([O-])([O-])=O
 
* common name:
 
* common name:
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** tubulin-tyrosine_ligase
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** adenosine 3',5'-bisphosphate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
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** InChIKey=WHTCPDAXWFLDIH-KQYNXXCUSA-J
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* molecular weight:
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** 423.172   
 
* Synonym(s):
 
* Synonym(s):
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** adenosine-3',5'-bisphosphate
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** 3',5'-ADP
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** phosphoadenosine phosphate
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** PAP
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
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** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Detyrosinated-alpha--tubulins]][c] '''=>''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-18303]]
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** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 detyrosinated α-tubulin[c] '''=>''' 1 α-tubulin[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c]
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* [[RXN-18301]]
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* [[RXN-10614]]
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== Genes associated with this reaction  ==
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* [[RXN-10615]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HOLO-ACP-SYNTH-RXN]]
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* [[Tiso_gene_17450]]
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* [[RXN-15889]]
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** [[pantograph]]-[[esiliculosus]]
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* [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
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* [[Tiso_gene_4516]]
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* [[RXN-11059]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-10777]]
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* [[Tiso_gene_20330]]
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* [[ENTDB-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN6666-9]]
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* [[Tiso_gene_10440]]
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* [[RXN-10782]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-11058]]
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* [[Tiso_gene_9268]]
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== Reaction(s) of unknown directionality ==
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-16759]]
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* [[Tiso_gene_17589]]
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* [[PAPSPAPtm]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN]]
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* [[Tiso_gene_17234]]
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* [[RXN-15588]]
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** [[pantograph]]-[[esiliculosus]]
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* [[ARYL-SULFOTRANSFERASE-RXN]]
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* [[Tiso_gene_14575]]
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* [[1.8.4.8-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-15589]]
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* [[Tiso_gene_10591]]
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* [[RXN-10994]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-17203]]
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* [[Tiso_gene_3379]]
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* [[RXN-15587]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PAPSPAPthr]]
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* [[Tiso_gene_15094]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15093]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5828]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 1053-73-2
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** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
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* BIGG : pap
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P38160 P38160]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23615194 23615194]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB00061
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{{#set: common name=tubulin-tyrosine_ligase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-6.3.2.25}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00054 C00054]
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{{#set: gene associated=Tiso_gene_17450|Tiso_gene_4516|Tiso_gene_20330|Tiso_gene_10440|Tiso_gene_9268|Tiso_gene_17589|Tiso_gene_17234|Tiso_gene_14575|Tiso_gene_10591|Tiso_gene_3379|Tiso_gene_15094|Tiso_gene_15093|Tiso_gene_5828}}
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* CHEMSPIDER:
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{{#set: in pathway=}}
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** [http://www.chemspider.com/Chemical-Structure.19951095.html 19951095]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58343 58343]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* METABOLIGHTS : MTBLC58343
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{{#set: smiles=C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)OP(=O)([O-])[O-]))OP([O-])([O-])=O}}
 +
{{#set: common name=adenosine 3',5'-bisphosphate}}
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{{#set: inchi key=InChIKey=WHTCPDAXWFLDIH-KQYNXXCUSA-J}}
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{{#set: molecular weight=423.172    }}
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{{#set: common name=adenosine-3',5'-bisphosphate|3',5'-ADP|phosphoadenosine phosphate|PAP}}
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{{#set: consumed by=325-BISPHOSPHATE-NUCLEOTIDASE-RXN}}
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{{#set: produced by=RXN-18303|RXN-18301|RXN-10614|RXN-10615|HOLO-ACP-SYNTH-RXN|RXN-15889|GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN|RXN-11059|RXN-10777|ENTDB-RXN|RXN6666-9|RXN-10782|RXN-11058}}
 +
{{#set: reversible reaction associated=RXN-16759|PAPSPAPtm|PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN|RXN-15588|ARYL-SULFOTRANSFERASE-RXN|1.8.4.8-RXN|RXN-15589|RXN-10994|RXN-17203|RXN-15587|PAPSPAPthr}}

Revision as of 16:03, 21 March 2018

Metabolite 3-5-ADP

  • smiles:
    • C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)OP(=O)([O-])[O-]))OP([O-])([O-])=O
  • common name:
    • adenosine 3',5'-bisphosphate
  • inchi key:
    • InChIKey=WHTCPDAXWFLDIH-KQYNXXCUSA-J
  • molecular weight:
    • 423.172
  • Synonym(s):
    • adenosine-3',5'-bisphosphate
    • 3',5'-ADP
    • phosphoadenosine phosphate
    • PAP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 1053-73-2
  • BIGG : pap
  • PUBCHEM:
  • HMDB : HMDB00061
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58343
"C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)OP(=O)([O-])[O-]))OP([O-])([O-])=O" cannot be used as a page name in this wiki.




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