Difference between revisions of "Oligosaccharides"

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(Created page with "Category:Gene == Gene Tiso_gene_14301 == * left end position: ** 162 * transcription direction: ** POSITIVE * right end position: ** 4141 * centisome position: ** 2.825253...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12198 RXN-12198] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14301 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12198 RXN-12198] ==
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* left end position:
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* direction:
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** 162
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 4141
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** [http://enzyme.expasy.org/EC/3.6.1.6 EC-3.6.1.6]
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* centisome position:
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** 2.825253   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENYLATECYC-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 CDP[c] '''=>''' 1 CMP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_20236]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12899]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=162}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00514 R00514]
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{{#set: right end position=4141}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=2.825253    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=ADENYLATECYC-RXN}}
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{{#set: ec number=EC-3.6.1.6}}
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:03, 21 March 2018

Reaction RXN-12198

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 CDP[c] => 1 CMP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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