Difference between revisions of "Cis-delta15-gheddoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** saccharopine_dehydrogen...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANIOL GERANIOL] == * smiles: ** CC(C)=CCCC(=CCO)C * common name: ** geraniol * inchi key: **...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANIOL GERANIOL] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)=CCCC(=CCO)C
 
* common name:
 
* common name:
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** saccharopine_dehydrogenase
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** geraniol
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.5.1.9 EC-1.5.1.9]
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** InChIKey=GLZPCOQZEFWAFX-JXMROGBWSA-N
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* molecular weight:
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** 154.252   
 
* Synonym(s):
 
* Synonym(s):
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** lemonol
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** geranyl alcohol
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** trans-geraniol
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** trans-3,7-dimethyl-2,6-octadien-1-ol
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** (E)-geraniol
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-9192]]
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** 1 [[WATER]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ALLYSINE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 L-saccharopine[c] '''+''' 1 NAD+[c] '''=>''' 1 L-glutamate[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 (S)-2-amino-6-oxohexanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1156]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_10095]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7038]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9366]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7039]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4160]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24520 24520]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=637566 637566]
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* LIGAND-RXN:
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* CAS : 106-24-1
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** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
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* LIPID_MAPS : LMPR0102010016
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{{#set: direction=LEFT-TO-RIGHT}}
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* NCI:
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{{#set: common name=saccharopine_dehydrogenase}}
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** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=9279 9279]
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{{#set: ec number=EC-1.5.1.9}}
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* HMDB : HMDB35155
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{{#set: gene associated=Tiso_gene_1156|Tiso_gene_10095|Tiso_gene_7038|Tiso_gene_9366|Tiso_gene_7039|Tiso_gene_4160}}
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* LIGAND-CPD:
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{{#set: in pathway=LYSINE-DEG1-PWY}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01500 C01500]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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** [http://www.chemspider.com/Chemical-Structure.13849989.html 13849989]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17447 17447]
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{{#set: smiles=CC(C)=CCCC(=CCO)C}}
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{{#set: common name=geraniol}}
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{{#set: inchi key=InChIKey=GLZPCOQZEFWAFX-JXMROGBWSA-N}}
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{{#set: molecular weight=154.252    }}
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{{#set: common name=lemonol|geranyl alcohol|trans-geraniol|trans-3,7-dimethyl-2,6-octadien-1-ol|(E)-geraniol}}
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{{#set: consumed by=RXN-9192}}

Revision as of 16:04, 21 March 2018

Metabolite GERANIOL

  • smiles:
    • CC(C)=CCCC(=CCO)C
  • common name:
    • geraniol
  • inchi key:
    • InChIKey=GLZPCOQZEFWAFX-JXMROGBWSA-N
  • molecular weight:
    • 154.252
  • Synonym(s):
    • lemonol
    • geranyl alcohol
    • trans-geraniol
    • trans-3,7-dimethyl-2,6-octadien-1-ol
    • (E)-geraniol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




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