Difference between revisions of "Tiso gene 5825"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-3 RXN66-3] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.2....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6903 RXN-6903] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_gamma_hydroxybutyrat...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-3 RXN66-3] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6903 RXN-6903] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** probable_gamma_hydroxybutyrate_dehydrogenase
 +
** gamma_hydroxybutyrate_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[ACETALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[ACET]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''=>''' 1 [[4-HYDROXY-BUTYRATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 acetaldehyde[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 acetate[c] '''+''' 2 H+[c]
+
** 1 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 succinate semialdehyde[c] '''=>''' 1 4-hydroxybutanoate[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7322]]
+
* Gene: [[Tiso_gene_91]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_777]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7387]], hypotaurine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7387 PWY-7387]
+
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY66-161]], ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25295 25295]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00710 R00710]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.2.1.3}}
+
{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_7322}}
+
{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
−
{{#set: in pathway=PWY-7387|PWY66-161|PWY66-21|PWY66-162}}
+
{{#set: ec number=EC-1.1.1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: gene associated=Tiso_gene_91|Tiso_gene_777}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
+
{{#set: in pathway=PWY-4321}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:04, 21 March 2018

Reaction RXN-6903

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_gamma_hydroxybutyrate_dehydrogenase
    • gamma_hydroxybutyrate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4321, L-glutamate degradation IV: PWY-4321
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5825&oldid=38551"