Difference between revisions of "4.2.99.18-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME294 RME294] == * direction: ** LEFT-TO-RIGHT * common name: ** RME294 * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME294 RME294] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** RME294
+
** bifunctional_purine_biosynthesis
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.1.2.3 EC-2.1.2.3]
 
* Synonym(s):
 
* Synonym(s):
 +
** 5-aminoimidazole-4-carboxamide ribonucleotide transformylase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 0.1118 [[L-PHOSPHATIDATE]][c] '''+''' 32.687 [[ATP]][c] '''+''' 0.8456 [[General-Protein-Substrates]][c] '''+''' 0.0402 [[RNA-Holder]][c] '''+''' 32.687 [[WATER]][c] '''+''' 0.0014 [[DNA-Holder]][c] '''+''' 0.0026 [[CHLOROPHYLL-A]][c] '''=>''' 32.687 [[ADP]][c] '''+''' 1.0 [[Biomass-Compositions]][c] '''+''' 32.687 [[PROTON]][c] '''+''' 32.687 [[Pi]][c]
+
** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[AICAR]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c] '''+''' 1 [[THF-GLU-N]][c]
 
* With common name(s):
 
* With common name(s):
−
**
+
** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''<=>''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c] '''+''' 1 a tetrahydrofolate[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_18420]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[manual]]
 
* Category: [[manual]]
 
** Source: [[manual-primary_network]]
 
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=RME294}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22192 22192]
−
{{#set: in pathway=}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=manual}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04560 R04560]
−
{{#set: reconstruction source=manual-primary_network}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P43852 P43852]
 +
** [http://www.uniprot.org/uniprot/P12048 P12048]
 +
** [http://www.uniprot.org/uniprot/P31335 P31335]
 +
** [http://www.uniprot.org/uniprot/P26978 P26978]
 +
** [http://www.uniprot.org/uniprot/P15639 P15639]
 +
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
 +
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
 +
** [http://www.uniprot.org/uniprot/P31939 P31939]
 +
** [http://www.uniprot.org/uniprot/Q59493 Q59493]
 +
** [http://www.uniprot.org/uniprot/P38009 P38009]
 +
** [http://www.uniprot.org/uniprot/P54113 P54113]
 +
** [http://www.uniprot.org/uniprot/O64767 O64767]
 +
** [http://www.uniprot.org/uniprot/O74928 O74928]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=bifunctional_purine_biosynthesis}}
 +
{{#set: ec number=EC-2.1.2.3}}
 +
{{#set: common name=5-aminoimidazole-4-carboxamide ribonucleotide transformylase}}
 +
{{#set: gene associated=Tiso_gene_18420}}
 +
{{#set: in pathway=PWY-6123|PWY-6124}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:04, 21 March 2018

Reaction AICARTRANSFORM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • bifunctional_purine_biosynthesis
  • ec number:
  • Synonym(s):
    • 5-aminoimidazole-4-carboxamide ribonucleotide transformylase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an N10-formyl-tetrahydrofolate[c] + 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] <=> 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c] + 1 a tetrahydrofolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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