Difference between revisions of "Tiso gene 10406"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-11417 RXN3DJ-11417] == * direction: ** LEFT-TO-RIGHT * common name: ** sphingosine_kinase_1...")
(Created page with "Category:Gene == Gene Tiso_gene_7305 == * right end position: ** 11083 * transcription direction: ** NEGATIVE * left end position: ** 4066 * centisome position: ** 35.8870...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-11417 RXN3DJ-11417] ==
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== Gene Tiso_gene_7305 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11083
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* common name:
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* transcription direction:
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** sphingosine_kinase_1
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.91 EC-2.7.1.91]
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** 4066
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* centisome position:
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** 35.887028   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FARNESYLTRANSTRANSFERASE-RXN]]
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** 1 [[SPHINGOSINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CPD3DJ-11366]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 sphingosine[c] '''+''' 1 ATP[c] '''=>''' 1 sphingosine 1-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1163]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7736]]
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* [[PWY-7492]]
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* [[PWY-6659]]
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* [[PWY-6691]]
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* [[PWY-5120]]
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* [[PWY-7517]]
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* [[PWY-7721]]
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* [[PWY-7720]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=11083}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01926 R01926]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4066}}
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{{#set: common name=sphingosine_kinase_1}}
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{{#set: centisome position=35.887028    }}
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{{#set: ec number=EC-2.7.1.91}}
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{{#set: reaction associated=FARNESYLTRANSTRANSFERASE-RXN}}
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{{#set: gene associated=Tiso_gene_1163}}
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{{#set: pathway associated=PWY-7736|PWY-7492|PWY-6659|PWY-6691|PWY-5120|PWY-7517|PWY-7721|PWY-7720}}
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{{#set: in pathway=PWY3DJ-11470}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 17:05, 21 March 2018

Gene Tiso_gene_7305

  • right end position:
    • 11083
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4066
  • centisome position:
    • 35.887028
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10406&oldid=38693"