Difference between revisions of "RXN-16333"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTI-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Gene == Gene Tiso_gene_15991 == * right end position: ** 2366 * transcription direction: ** NEGATIVE * left end position: ** 622 * centisome position: ** 13.34477...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTI-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN] ==
+
== Gene Tiso_gene_15991 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2366
−
* common name:
+
* transcription direction:
−
** ribonucleoside-diphosphate_reductase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
+
** 622
 +
* centisome position:
 +
** 13.344775   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.3.1.180-RXN]]
−
** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[Ribonucleoside-Diphosphates]][c] '''=>''' 1 [[Deoxy-Ribonucleoside-Diphosphates]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
+
−
* With common name(s):
+
−
** 1 a reduced thioredoxin[c] '''+''' 1 a ribonucleoside diphosphate[c] '''=>''' 1 a 2'-deoxyribonucleoside 5'-diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_10617]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10138]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_9915]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9916]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[2.3.1.41-RXN]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[ACP-S-ACETYLTRANSFER-RXN]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
* Reaction: [[RXN-10059]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-10654]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-10658]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-11474]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-11479]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9516]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9523]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9527]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9531]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9535]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9539]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9632]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9648]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9650]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9651]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9652]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9653]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9654]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-1003]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-132]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-138]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-218]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-236]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-26]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-306]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-324]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-368]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-445]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-460]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-499]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN1G-840]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN3O-1803]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[PWY-6113]]
 +
* [[FASYN-ELONG-PWY]]
 +
* [[PWY-6519]]
 +
* [[PWY-7388]]
 +
* [[PWY-5971]]
 +
* [[PWY-6282]]
 +
* [[PWY-5965]]
 +
* [[PWY-5989]]
 +
* [[PWY-5966]]
 +
* [[PWYG-321]]
 +
* [[FASYN-INITIAL-PWY]]
 +
* [[PWY-5994]]
 +
* [[PWY3O-355]]
 +
* [[PWY-4381]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2366}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23252 23252]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=622}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04294 R04294]
+
{{#set: centisome position=13.344775    }}
−
* UNIPROT:
+
{{#set: reaction associated=2.3.1.180-RXN|2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|ACP-S-ACETYLTRANSFER-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN1G-1003|RXN1G-132|RXN1G-138|RXN1G-218|RXN1G-236|RXN1G-26|RXN1G-306|RXN1G-324|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN1G-840|RXN3O-1803}}
−
** [http://www.uniprot.org/uniprot/P89462 P89462]
+
{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-5994|PWY3O-355|PWY-4381}}
−
** [http://www.uniprot.org/uniprot/Q7M0K8 Q7M0K8]
+
−
** [http://www.uniprot.org/uniprot/Q91YM8 Q91YM8]
+
−
** [http://www.uniprot.org/uniprot/P09938 P09938]
+
−
** [http://www.uniprot.org/uniprot/Q8IL94 Q8IL94]
+
−
** [http://www.uniprot.org/uniprot/P32984 P32984]
+
−
** [http://www.uniprot.org/uniprot/P50647 P50647]
+
−
** [http://www.uniprot.org/uniprot/P50650 P50650]
+
−
** [http://www.uniprot.org/uniprot/P50620 P50620]
+
−
** [http://www.uniprot.org/uniprot/O83972 O83972]
+
−
** [http://www.uniprot.org/uniprot/P43755 P43755]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ87 Q9PJ87]
+
−
** [http://www.uniprot.org/uniprot/P39452 P39452]
+
−
** [http://www.uniprot.org/uniprot/O66503 O66503]
+
−
** [http://www.uniprot.org/uniprot/Q9JU45 Q9JU45]
+
−
** [http://www.uniprot.org/uniprot/P47473 P47473]
+
−
** [http://www.uniprot.org/uniprot/P37146 P37146]
+
−
** [http://www.uniprot.org/uniprot/O26748 O26748]
+
−
** [http://www.uniprot.org/uniprot/O28609 O28609]
+
−
** [http://www.uniprot.org/uniprot/Q9PIR3 Q9PIR3]
+
−
** [http://www.uniprot.org/uniprot/Q9JU43 Q9JU43]
+
−
** [http://www.uniprot.org/uniprot/P55982 P55982]
+
−
** [http://www.uniprot.org/uniprot/P03190 P03190]
+
−
** [http://www.uniprot.org/uniprot/P00452 P00452]
+
−
** [http://www.uniprot.org/uniprot/P69924 P69924]
+
−
** [http://www.uniprot.org/uniprot/P07201 P07201]
+
−
** [http://www.uniprot.org/uniprot/P26713 P26713]
+
−
** [http://www.uniprot.org/uniprot/P11158 P11158]
+
−
** [http://www.uniprot.org/uniprot/P11157 P11157]
+
−
** [http://www.uniprot.org/uniprot/P23921 P23921]
+
−
** [http://www.uniprot.org/uniprot/P31350 P31350]
+
−
** [http://www.uniprot.org/uniprot/Q60561 Q60561]
+
−
** [http://www.uniprot.org/uniprot/Q03604 Q03604]
+
−
** [http://www.uniprot.org/uniprot/P37426 P37426]
+
−
** [http://www.uniprot.org/uniprot/P17424 P17424]
+
−
** [http://www.uniprot.org/uniprot/P36602 P36602]
+
−
** [http://www.uniprot.org/uniprot/P36603 P36603]
+
−
** [http://www.uniprot.org/uniprot/P50643 P50643]
+
−
** [http://www.uniprot.org/uniprot/P50645 P50645]
+
−
** [http://www.uniprot.org/uniprot/Q66662 Q66662]
+
−
** [http://www.uniprot.org/uniprot/Q66663 Q66663]
+
−
** [http://www.uniprot.org/uniprot/P49723 P49723]
+
−
** [http://www.uniprot.org/uniprot/P50651 P50651]
+
−
** [http://www.uniprot.org/uniprot/P78027 P78027]
+
−
** [http://www.uniprot.org/uniprot/P74240 P74240]
+
−
** [http://www.uniprot.org/uniprot/O36410 O36410]
+
−
** [http://www.uniprot.org/uniprot/O36411 O36411]
+
−
** [http://www.uniprot.org/uniprot/P49730 P49730]
+
−
** [http://www.uniprot.org/uniprot/Q89941 Q89941]
+
−
** [http://www.uniprot.org/uniprot/Q98526 Q98526]
+
−
** [http://www.uniprot.org/uniprot/O41111 O41111]
+
−
** [http://www.uniprot.org/uniprot/Q9YMK7 Q9YMK7]
+
−
** [http://www.uniprot.org/uniprot/Q9YMI1 Q9YMI1]
+
−
** [http://www.uniprot.org/uniprot/Q9YMI0 Q9YMI0]
+
−
** [http://www.uniprot.org/uniprot/O57175 O57175]
+
−
** [http://www.uniprot.org/uniprot/O39262 O39262]
+
−
** [http://www.uniprot.org/uniprot/O39263 O39263]
+
−
** [http://www.uniprot.org/uniprot/Q9YTK7 Q9YTK7]
+
−
** [http://www.uniprot.org/uniprot/Q9YTK6 Q9YTK6]
+
−
** [http://www.uniprot.org/uniprot/Q9UW15 Q9UW15]
+
−
** [http://www.uniprot.org/uniprot/Q9SJ20 Q9SJ20]
+
−
** [http://www.uniprot.org/uniprot/P03175 P03175]
+
−
** [http://www.uniprot.org/uniprot/P09247 P09247]
+
−
** [http://www.uniprot.org/uniprot/P09248 P09248]
+
−
** [http://www.uniprot.org/uniprot/P28847 P28847]
+
−
** [http://www.uniprot.org/uniprot/P28846 P28846]
+
−
** [http://www.uniprot.org/uniprot/P69520 P69520]
+
−
** [http://www.uniprot.org/uniprot/Q01319 Q01319]
+
−
** [http://www.uniprot.org/uniprot/P10224 P10224]
+
−
** [http://www.uniprot.org/uniprot/P16782 P16782]
+
−
** [http://www.uniprot.org/uniprot/P20503 P20503]
+
−
** [http://www.uniprot.org/uniprot/P26685 P26685]
+
−
** [http://www.uniprot.org/uniprot/P12848 P12848]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ribonucleoside-diphosphate_reductase}}
+
−
{{#set: ec number=EC-1.17.4.1}}
+
−
{{#set: gene associated=Tiso_gene_10617|Tiso_gene_10138|Tiso_gene_9915|Tiso_gene_9916}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 17:05, 21 March 2018

Gene Tiso_gene_15991

  • right end position:
    • 2366
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 622
  • centisome position:
    • 13.344775
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16333&oldid=38715"