Difference between revisions of "Tiso gene 14462"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Tiso_gene_14204 == * right end position: ** 2821 * transcription direction: ** NEGATIVE * left end position: ** 2457 * centisome position: ** 42.4645...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
+
== Gene Tiso_gene_14204 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2821
−
* common name:
+
* transcription direction:
−
** nucleoredoxin
+
** NEGATIVE
−
** ORF
+
* left end position:
−
** thioredoxin_reductase_tr1
+
** 2457
−
** thioredoxin_reductase
+
* centisome position:
−
* ec number:
+
** 42.46457   
−
** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN0-4261]]
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
+
−
* With common name(s):
+
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 an oxidized thioredoxin[c] '''=>''' 1 NADP+[c] '''+''' 1 a reduced thioredoxin[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_16927]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_475]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18783]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15704]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2821}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=2457}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
+
{{#set: centisome position=42.46457    }}
−
* UNIPROT:
+
{{#set: reaction associated=RXN0-4261}}
−
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
+
−
** [http://www.uniprot.org/uniprot/P56431 P56431]
+
−
** [http://www.uniprot.org/uniprot/O28718 O28718]
+
−
** [http://www.uniprot.org/uniprot/P80880 P80880]
+
−
** [http://www.uniprot.org/uniprot/P43496 P43496]
+
−
** [http://www.uniprot.org/uniprot/P94284 P94284]
+
−
** [http://www.uniprot.org/uniprot/O66790 O66790]
+
−
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
+
−
** [http://www.uniprot.org/uniprot/P47348 P47348]
+
−
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
+
−
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
+
−
** [http://www.uniprot.org/uniprot/O26804 O26804]
+
−
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
+
−
** [http://www.uniprot.org/uniprot/P43788 P43788]
+
−
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
+
−
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
+
−
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
+
−
** [http://www.uniprot.org/uniprot/P23160 P23160]
+
−
** [http://www.uniprot.org/uniprot/P39916 P39916]
+
−
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
+
−
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
+
−
** [http://www.uniprot.org/uniprot/P38816 P38816]
+
−
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
+
−
** [http://www.uniprot.org/uniprot/P29509 P29509]
+
−
** [http://www.uniprot.org/uniprot/P52213 P52213]
+
−
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
+
−
** [http://www.uniprot.org/uniprot/P75531 P75531]
+
−
** [http://www.uniprot.org/uniprot/P74746 P74746]
+
−
** [http://www.uniprot.org/uniprot/P46843 P46843]
+
−
** [http://www.uniprot.org/uniprot/O54535 O54535]
+
−
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
+
−
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
+
−
** [http://www.uniprot.org/uniprot/P52215 P52215]
+
−
** [http://www.uniprot.org/uniprot/P51978 P51978]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=nucleoredoxin}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=thioredoxin_reductase_tr1}}
+
−
{{#set: common name=thioredoxin_reductase}}
+
−
{{#set: ec number=EC-1.8.1.9}}
+
−
{{#set: gene associated=Tiso_gene_16927|Tiso_gene_475|Tiso_gene_18783|Tiso_gene_15704}}
+
−
{{#set: in pathway=THIOREDOX-PWY}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 17:07, 21 March 2018

Gene Tiso_gene_14204

  • right end position:
    • 2821
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2457
  • centisome position:
    • 42.46457
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14462&oldid=38893"