Difference between revisions of "ACET"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH_2mb2coa MCDH_2mb2coa] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methylacyl-coa dehy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] == * direction: ** REVERSIBLE * common name: ** D-sorbitol 2-dehydrogenase ** po...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH_2mb2coa MCDH_2mb2coa] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming
+
** D-sorbitol 2-dehydrogenase
 +
** polyketide_synthase
 +
** l-iditol_2-dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[FAD]][m] '''+''' 1.0 [[2-METHYL-BUTYRYL-COA]][m] '''=>''' 1.0 [[FADH2]][m] '''+''' 1.0 [[CPD-1083]][m]
+
** 1 [[SORBITOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-15382]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 FAD[m] '''+''' 1.0 2-methylbutanoyl-CoA[m] '''=>''' 1.0 FADH2[m] '''+''' 1.0 (E)-2-methylcrotonoyl-CoA[m]
+
** 1 D-sorbitol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 keto-D-fructose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16113]]
+
* Gene: [[Tiso_gene_5424]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_10643]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18533]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_15088]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33031 33031]
−
{{#set: gene associated=Tiso_gene_16113|Tiso_gene_10643}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00875 R00875]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: common name=D-sorbitol 2-dehydrogenase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=polyketide_synthase}}
 +
{{#set: common name=l-iditol_2-dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.14}}
 +
{{#set: gene associated=Tiso_gene_5424|Tiso_gene_6562|Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_6563|Tiso_gene_5425}}
 +
{{#set: in pathway=PWY-4101}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:07, 21 March 2018

Reaction RXN-7644

  • direction:
    • REVERSIBLE
  • common name:
    • D-sorbitol 2-dehydrogenase
    • polyketide_synthase
    • l-iditol_2-dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-sorbitol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 NADH[c] + 1 keto-D-fructose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4101, D-sorbitol degradation I: PWY-4101
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ACET&oldid=38903"