Difference between revisions of "Decanoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PAPSPAPthr PAPSPAPthr] == * direction: ** REVERSIBLE * common name: ** PAPS:PAP antiporter, chlorop...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == * direction: ** REVERSIBLE * common name: ** hydroxyacyl-coenzyme_a_dehydro...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PAPSPAPthr PAPSPAPthr] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** PAPS:PAP antiporter, chloroplast
+
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 +
** 3-hydroxyacyl-_dehydrogenase
 +
** hydroxyacyl-coenzyme_a_mitochondrial
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3-5-ADP]][c] '''+''' 1.0 [[PAPS]][h] '''<=>''' 1.0 [[PAPS]][c] '''+''' 1.0 [[3-5-ADP]][h]
+
** 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[3-KETO-ADIPYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 adenosine 3',5'-bisphosphate[c] '''+''' 1.0 3'-phosphoadenylyl-sulfate[h] '''<=>''' 1.0 3'-phosphoadenylyl-sulfate[c] '''+''' 1.0 adenosine 3',5'-bisphosphate[h]
+
** 1 (3S)-hydroxyadipyl-CoA[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxoadipyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5277]]
+
* Gene: [[Tiso_gene_18839]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14027]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14262]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5857]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14026]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18838]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34851 34851]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=PAPS:PAP antiporter, chloroplast}}
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
{{#set: gene associated=Tiso_gene_5277}}
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
−
{{#set: in pathway=}}
+
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: gene associated=Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_14262|Tiso_gene_5857|Tiso_gene_14026|Tiso_gene_18838}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-1361|PWY0-321}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:07, 21 March 2018

Reaction RXN0-2044

  • direction:
    • REVERSIBLE
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1361, benzoyl-CoA degradation I (aerobic): PWY-1361
    • 2 reactions found over 7 reactions in the full pathway
  • PWY0-321, phenylacetate degradation I (aerobic): PWY0-321
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






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