Difference between revisions of "RXN-2425"

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(Created page with "Category:Gene == Gene Tiso_gene_14462 == * left end position: ** 1112 * transcription direction: ** NEGATIVE * right end position: ** 4221 * centisome position: ** 19.7128...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucokinase ** hexoki...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14462 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] ==
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* left end position:
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* direction:
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** 1112
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** glucokinase
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* right end position:
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** hexokinase
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** 4221
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.1.1 EC-2.7.1.1]
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** 19.712816   
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** [http://enzyme.expasy.org/EC/2.7.1.2 EC-2.7.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[KDOTRANS-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 ATP[c] '''+''' 1 D-glucopyranose[c] '''=>''' 1 ADP[c] '''+''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 H+[c]
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* [[KDOSYN-PWY]]
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* [[PWY-7675]]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_3107]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_1303]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 +
** '''11''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1112}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17825 17825]
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{{#set: right end position=4221}}
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* LIGAND-RXN:
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{{#set: centisome position=19.712816    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01786 R01786]
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{{#set: reaction associated=KDOTRANS-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00299 R00299]
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{{#set: pathway associated=KDOSYN-PWY|PWY-7675}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P0A6V8 P0A6V8]
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** [http://www.uniprot.org/uniprot/P21908 P21908]
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** [http://www.uniprot.org/uniprot/P64254 P64254]
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** [http://www.uniprot.org/uniprot/Q8XDH5 Q8XDH5]
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** [http://www.uniprot.org/uniprot/Q8XDH4 Q8XDH4]
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** [http://www.uniprot.org/uniprot/Q9CE25 Q9CE25]
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** [http://www.uniprot.org/uniprot/P52792 P52792]
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** [http://www.uniprot.org/uniprot/Q9V2Z6 Q9V2Z6]
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** [http://www.uniprot.org/uniprot/Q7M537 Q7M537]
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** [http://www.uniprot.org/uniprot/P17709 P17709]
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** [http://www.uniprot.org/uniprot/Q04409 Q04409]
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** [http://www.uniprot.org/uniprot/Q92407 Q92407]
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** [http://www.uniprot.org/uniprot/O31392 O31392]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glucokinase}}
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{{#set: common name=hexokinase}}
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{{#set: ec number=EC-2.7.1.1}}
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{{#set: ec number=EC-2.7.1.2}}
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{{#set: gene associated=Tiso_gene_3107|Tiso_gene_1303}}
 +
{{#set: in pathway=PWY0-1182|PWY-7238|GLYCOCAT-PWY|TREDEGLOW-PWY|PWY-621|PWY-7385|P124-PWY|PWY-5514|GLUCOSE1PMETAB-PWY|ANAGLYCOLYSIS-PWY|PWY-2723|P122-PWY|PWY-2722|PWY-5661}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:08, 21 March 2018

Reaction GLUCOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glucokinase
    • hexokinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1182, trehalose degradation II (trehalase): PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 6 reactions found over 8 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • TREDEGLOW-PWY, trehalose degradation I (low osmolarity): TREDEGLOW-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase): PWY-621
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 5 reactions found over 9 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 11 reactions found over 15 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
    • 5 reactions found over 7 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation: GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-2723, trehalose degradation V: PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway
  • PWY-2722, trehalose degradation IV: PWY-2722
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5661, GDP-glucose biosynthesis: PWY-5661
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-2425&oldid=38988"