Difference between revisions of "MG-PROTOPORPHYRIN"

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(Created page with "Category:Gene == Gene Tiso_gene_16968 == * left end position: ** 9 * transcription direction: ** POSITIVE * right end position: ** 3667 * centisome position: ** 0.22488755...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent_glutam...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16968 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] ==
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* left end position:
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* direction:
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** 9
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ferredoxin-dependent_glutamate_synthase
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* right end position:
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** 3667
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* centisome position:
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** 0.22488755   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[FUMARATE-REDUCTASE-NADH-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''+''' 1 L-glutamate[c] '''=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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* [[R00357]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[synechocystis]]
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* Gene: [[Tiso_gene_1773]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_1154]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2581]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=9}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086]
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{{#set: right end position=3667}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=0.22488755    }}
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{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
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{{#set: reaction associated=FUMARATE-REDUCTASE-NADH-RXN|R00357}}
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{{#set: gene associated=Tiso_gene_1773|Tiso_gene_1154|Tiso_gene_2581}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:08, 21 March 2018

Reaction RXN-12878

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent_glutamate_synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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