Difference between revisions of "RXN-13198"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphatidate_c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-546 RXN66-546] == * direction: ** LEFT-TO-RIGHT * common name: ** pyrroline-5-carboxylate_red...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-546 RXN66-546] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phosphatidate_cytidylyltransferase
+
** pyrroline-5-carboxylate_reductase
 +
** ORF
 +
** ankyrin_repeat-containing_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.7.41 EC-2.7.7.41]
+
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PYRROLINE-HYDROXY-CARBOXYLATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[4-HYDROXY-L-PROLINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 CTP[c] '''=>''' 1 a CDP-diacylglycerol[c] '''+''' 1 diphosphate[c]
+
** 1 NAD(P)H[c] '''+''' 1 (3R,5S)-1-pyrroline-3-hydroxy-5-carboxylate[c] '''+''' 2 H+[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 trans-4-hydroxy-L-proline[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2311]]
+
* Gene: [[Tiso_gene_20218]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_3523]]
+
* Gene: [[Tiso_gene_8625]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_3522]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17059]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19254]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
 
−
** '''7''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16229 16229]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JX34 Q9JX34]
 
−
** [http://www.uniprot.org/uniprot/Q9PMV2 Q9PMV2]
 
−
** [http://www.uniprot.org/uniprot/Q59640 Q59640]
 
−
** [http://www.uniprot.org/uniprot/P73548 P73548]
 
−
** [http://www.uniprot.org/uniprot/P0ABG1 P0ABG1]
 
−
** [http://www.uniprot.org/uniprot/O04940 O04940]
 
−
** [http://www.uniprot.org/uniprot/Q49433 Q49433]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phosphatidate_cytidylyltransferase}}
+
{{#set: common name=pyrroline-5-carboxylate_reductase}}
−
{{#set: ec number=EC-2.7.7.41}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_2311|Tiso_gene_3523|Tiso_gene_3522}}
+
{{#set: common name=ankyrin_repeat-containing_protein}}
−
{{#set: in pathway=PWY-7817|PWY-5667|PWY-5981|PWY0-1319}}
+
{{#set: ec number=EC-1.5.1.2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: gene associated=Tiso_gene_20218|Tiso_gene_8625|Tiso_gene_17059|Tiso_gene_19254}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:08, 21 March 2018

Reaction RXN66-546

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyrroline-5-carboxylate_reductase
    • ORF
    • ankyrin_repeat-containing_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13198&oldid=39108"