Difference between revisions of "THYROXINE-DEIODINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** queuine_trna-ribosyltransfe...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUC-COA SUC-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUC-COA SUC-COA] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** queuine_trna-ribosyltransferase
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** succinyl-CoA
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
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** InChIKey=VNOYUJKHFWYWIR-ITIYDSSPSA-I
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* molecular weight:
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** 862.568   
 
* Synonym(s):
 
* Synonym(s):
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** suc-coa
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** succ-coenzyme-A
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** succ-S-coenzyme-A
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** succinyl-S-coenzyme-A
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** succ-S-CoA
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** succinylcoenzyme-A
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** succ-CoA
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** suc-co-A
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** succinyl-S-CoA
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** succinyl-coenzyme A
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''=>''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c] '''+''' 1 [[GUANINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[3-OXOACID-COA-TRANSFERASE-RXN]]
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** 1 preQ1[c] '''+''' 1 a guanine34 in tRNA[c] '''=>''' 1 a 7-aminomethyl-7-deazaguanosine34 in tRNA[c] '''+''' 1 guanine[c]
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* [[RXN0-1147]]
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* [[SUCL_gdp_m]]
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== Genes associated with this reaction  ==
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* [[RXNI-2]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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* [[Tiso_gene_18857]]
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* [[SUCCCOASYN-RXN]]
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** IN-SILICO_ANNOTATION
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* [[METHYLMALONYL-COA-MUT-RXN]]
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***EC-NUMBER
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* [[AKGDHe2r]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12326]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6700]], queuosine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6700 PWY-6700]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 604-98-8
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** [http://www.genome.jp/dbget-bin/www_bget?R10209 R10209]
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* BIGG : succoa
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=queuine_trna-ribosyltransferase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266545 45266545]
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{{#set: ec number=EC-2.4.2.29}}
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* HMDB : HMDB01022
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{{#set: gene associated=Tiso_gene_18857|Tiso_gene_12326|Tiso_gene_17}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-6700}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00091 C00091]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57292 57292]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* METABOLIGHTS : MTBLC57292
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: common name=succinyl-CoA}}
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{{#set: inchi key=InChIKey=VNOYUJKHFWYWIR-ITIYDSSPSA-I}}
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{{#set: molecular weight=862.568    }}
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{{#set: common name=suc-coa|succ-coenzyme-A|succ-S-coenzyme-A|succinyl-S-coenzyme-A|succ-S-CoA|succinylcoenzyme-A|succ-CoA|suc-co-A|succinyl-S-CoA|succinyl-coenzyme A}}
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{{#set: reversible reaction associated=3-OXOACID-COA-TRANSFERASE-RXN|RXN0-1147|SUCL_gdp_m|RXNI-2|SUCCINATE--COA-LIGASE-GDP-FORMING-RXN|SUCCCOASYN-RXN|METHYLMALONYL-COA-MUT-RXN|AKGDHe2r}}

Revision as of 16:09, 21 March 2018

Metabolite SUC-COA

  • smiles:
    • CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • succinyl-CoA
  • inchi key:
    • InChIKey=VNOYUJKHFWYWIR-ITIYDSSPSA-I
  • molecular weight:
    • 862.568
  • Synonym(s):
    • suc-coa
    • succ-coenzyme-A
    • succ-S-coenzyme-A
    • succinyl-S-coenzyme-A
    • succ-S-CoA
    • succinylcoenzyme-A
    • succ-CoA
    • suc-co-A
    • succinyl-S-CoA
    • succinyl-coenzyme A

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 604-98-8
  • BIGG : succoa
  • PUBCHEM:
  • HMDB : HMDB01022
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57292
"CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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